LOCUS BC007553 2614 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens calpain 10, mRNA (cDNA clone MGC:15475 IMAGE:2967328), complete cds. ACCESSION BC007553 VERSION BC007553.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2614) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2614) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: d Column: 20. FEATURES Location/Qualifiers source 1..2614 /db_xref="H-InvDB:HIT000086843" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15475 IMAGE:2967328" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2614 /gene="CAPN10" /db_xref="GeneID:11132" /db_xref="HGNC:HGNC:1477" /db_xref="MIM:605286" CDS 146..2164 /gene="CAPN10" /codon_start=1 /product="calpain 10" /protein_id="AAH07553.2" /db_xref="GeneID:11132" /db_xref="HGNC:HGNC:1477" /db_xref="MIM:605286" /translation="MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWR RPQEICATPRLFPDDPREGQVKQGLLGDCWFLCACAALQKSRHLLDQVIPPGQPSWAD QEYRGSFTCRIWQFGRWVEVTTDDRLPCLAGRLCFSRCQREDVFWLPLLEKVYAKVHG SYEHLWAGQVADALVDLTGGLAERWNLKGVAGSGGQQDRPGRWEHRTCRQLLHLKDQC LISCCVLSPRAGARELGEFHAFIVSDLRELQGQAGQCILLLRIQNPWGRRCWQGLWRE GGEGWSQVDAAVASELLSQLQEGEFWVEEEEFLREFDELTVGYPVTEAGHLQSLYTER LLCHTRALPGAWVKGQSAGGCRNNSGFPSNPKFWLRVSEPSEVYIAVLQRSRLHAADW AGRARALVGDSHTSWSPASIPGKHYQAVGLHLWKVEKRRVNLPRVLSMPPVAGTACHA YDREVHLRCELSPGYYLAVPSTFLKDAPGEFLLRVFSTGRVSLSAIRAVAKNTTPGAA LPAGEWGTVQLRGSWRVGQTAGGSRNFASYPTNPCFPFSVPEGPGPRCVRITLHQHCR PSDTEFHPIGFHIFQVPEGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYK VVPSTYLPDTEGAFTVTIATRIDRPSIHSQEMLGQFLQEVSVMAVMKT" BASE COUNT 470 a 809 c 886 g 449 t ORIGIN 1 cacctgcggg gccctcgggc ttggagggct gggccgggcg gggaacgggc ggggcgggcc 61 ggaggcggcg gcggctgact cgccttctct ccggggctgc gaccccgagg caaccggctg 121 cagatgggag cccgcggagc cgaggatgcg ggcgggccgg ggcgcgacgc cggcgaggga 181 gctgttccgg gacgccgcct tccccgccgc ggactcctcg ctcttctgcg acttgtctac 241 gccgctggcc cagttccgcg aggacatcac gtggaggcgg ccccaggaga tttgtgccac 301 accccggctg tttccagatg acccacggga agggcaggtg aagcaggggc tgctggggga 361 ttgctggttc ctgtgtgcct gcgccgcgct gcagaagagc aggcacctcc tggaccaggt 421 cattcctccg ggacagccga gctgggccga ccaggagtac cggggctcct tcacctgtcg 481 catttggcag tttggacgct gggtggaggt gaccacagat gaccgcctgc cgtgccttgc 541 agggagactc tgtttctccc gctgccagag ggaggatgtg ttctggctcc ccttactgga 601 aaaggtctac gccaaggtcc atgggtccta cgagcacctg tgggccgggc aggtggcgga 661 tgccctggtg gacctgaccg gcggcctggc agaaagatgg aacctgaagg gcgtagcagg 721 aagcggaggc cagcaggaca ggccaggccg ctgggagcac aggacttgtc ggcagctgct 781 ccacctgaag gaccagtgtc tgatcagctg ctgcgtgctc agccccagag caggtgcccg 841 ggagctgggg gagttccatg ccttcattgt ctcggacctg cgggagctcc agggtcaggc 901 gggccagtgc atcctgctgc tgcggatcca gaacccctgg ggccggcggt gctggcaggg 961 gctctggaga gaggggggtg aagggtggag ccaggtagat gcagcggtag catctgagct 1021 cctgtcccag ctccaggaag gggagttctg ggtggaggag gaggagttcc tcagggagtt 1081 tgacgagctc accgttggct acccggtcac ggaggccggc cacctgcaga gcctctacac 1141 agagaggctg ctctgccata cgcgggcgct gcctggggcc tgggtcaagg gccagtcagc 1201 aggaggctgc cggaacaaca gcggctttcc cagcaacccc aaattctggc tgcgggtctc 1261 agaaccgagt gaggtgtaca ttgccgtcct gcagagatcc aggctgcacg cggcggactg 1321 ggcaggccgg gcccgggcac tggtgggtga cagtcatact tcgtggagcc cagcgagcat 1381 cccgggcaag cactaccagg ctgtgggtct gcacctctgg aaggtagaga agcggcgggt 1441 caatctgcct agggtcctgt ccatgccccc cgtggctggc accgcgtgcc atgcatacga 1501 ccgggaggtc cacctgcgtt gtgagctctc accgggctac tacctggctg tccccagcac 1561 cttcctgaag gacgcgccag gggagttcct gctccgagtc ttctctaccg ggcgagtctc 1621 ccttagcgcc atcagggcag tggccaagaa caccaccccc ggggcagccc tgcctgcggg 1681 ggagtggggg accgtgcagc tacggggttc ttggagagtc ggccagacgg cggggggcag 1741 caggaacttt gcctcatacc ccaccaaccc ctgcttcccc ttctcggtcc ccgagggccc 1801 tggcccccgc tgcgtccgca tcactctgca tcagcactgc cggcccagtg acaccgagtt 1861 ccaccccatc ggcttccata tcttccaggt cccagagggt ggaaggagcc aggacgcacc 1921 cccactgctg ctgcaggagc cgctgctgag ctgcgtgcca catcgctacg cccaggaggt 1981 gagccggctc tgcctcctgc ctgcaggcac ctacaaggtt gtgccctcca cctacctgcc 2041 ggacacagag ggggccttca cagtgaccat cgcaaccagg attgacaggc catccattca 2101 cagccaggag atgctgggcc agttcctcca agaggtctcc gtcatggcag tgatgaaaac 2161 ctaacagggt ggccccctgt gccagctcag gtgactggag cccgagggcc tgacaggttc 2221 ccagcagctg ggccggccag ccttgcactg tgggggctgg tcctgagtct tggcctgcct 2281 cccagccctg ccagggggct gcggcctagg ggtccacggg aagcctccgt caggagagac 2341 gcagccctgg gggccagctg gtgctgcaag gaagggtggg aagcttgctg gcttctgttg 2401 cgccactgag acggcagaga ccccaggatc ccagagcttc ccaggatccc tcccagatcc 2461 tctgctgact ccatatggag gcctcacacc cagagggtag ggcagcagat cttctttata 2521 actatttatt gttcgaatca cttttaggat gtaactttat aaataaacat gagcgctgat 2581 gatttgcaaa aaaaaaaaaa aaaaaaaaaa aaaa //