LOCUS BC007545 1298 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens STIP1 homology and U-box containing protein 1, mRNA
(cDNA clone MGC:15444 IMAGE:2959735), complete cds.
ACCESSION BC007545
VERSION BC007545.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1298)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1298)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: b Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56181386.
FEATURES Location/Qualifiers
source 1..1298
/db_xref="H-InvDB:HIT000033289"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15444 IMAGE:2959735"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1298
/gene="STUB1"
/gene_synonym="CHIP"
/gene_synonym="HSPABP2"
/gene_synonym="NY-CO-7"
/gene_synonym="SDCCAG7"
/gene_synonym="UBOX1"
/db_xref="GeneID:10273"
/db_xref="HGNC:HGNC:11427"
/db_xref="MIM:607207"
CDS 100..1011
/gene="STUB1"
/gene_synonym="CHIP"
/gene_synonym="HSPABP2"
/gene_synonym="NY-CO-7"
/gene_synonym="SDCCAG7"
/gene_synonym="UBOX1"
/codon_start=1
/product="STIP1 homology and U-box containing protein 1"
/protein_id="AAH07545.1"
/db_xref="GeneID:10273"
/db_xref="HGNC:HGNC:11427"
/db_xref="MIM:607207"
/translation="MKGKEEKEGGARLGAGGGSPEKSPSAQELKEQGNRLFVGRKYPE
AAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQ
CQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESE
LHSYLSRLIAAERERELEECQRNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQV
DEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLT
QEQLIPNLAMKEVIDAFISENGWVEDY"
BASE COUNT 282 a 372 c 434 g 210 t
ORIGIN
1 gagcggatcg cgggctcggg ctgcggggct ccggctgcgg gcgctgggcc gcgaggcgcg
61 gagcttggga gcggagccca ggccgtgccg cgcggcgcca tgaagggcaa ggaggagaag
121 gagggcggcg cacggctggg cgctggcggc ggaagccccg agaagagccc gagcgcgcag
181 gagctcaagg agcagggcaa tcgtctgttc gtgggccgaa agtacccgga ggcggcggcc
241 tgctacggcc gcgcgatcac ccggaacccg ctggtggccg tgtattacac caaccgggcc
301 ttgtgctacc tgaagatgca gcagcacgag caggccctgg ccgactgccg gcgcgccctg
361 gagctggacg ggcagtctgt gaaggcgcac ttcttcctgg ggcagtgcca gctggagatg
421 gagagctatg atgaggccat cgccaatctg cagcgagctt acagcctggc caaggagcag
481 cggctgaact tcggggacga catccccagc gctcttcgaa tcgcgaagaa gaagcgctgg
541 aacagcattg aggagcggcg catccaccag gagagcgagc tgcactccta cctctccagg
601 ctcattgccg cggagcgtga gagggagctg gaagagtgcc agcgaaacca cgagggtgat
661 gaggacgaca gccacgtccg ggcccagcag gcctgcattg aggccaagca cgacaagtac
721 atggcggaca tggacgagct tttttctcag gtggatgaga agaggaagaa gcgagacatc
781 cccgactacc tgtgtggcaa gatcagcttt gagctgatgc gggagccgtg catcacgccc
841 agtggcatca cctacgaccg caaggacatc gaggagcacc tgcagcgtgt gggtcatttt
901 gaccccgtga cccggagccc cctgacccag gaacagctca tccccaactt ggctatgaag
961 gaggttattg acgcattcat ctctgagaat ggctgggtgg aggactactg aggttccctg
1021 ccctacctgg cgtcctggtc caggggagcc ctgggcagaa gcccccggcc cctatacata
1081 gtttatgttc ctggccaccc cgaccgcttc ccccaagttc tgctgttgga ctctggactg
1141 tttcccctct cagcatcgct tttgctgggc cgtgatcgtc cccctttgtg ggctggaaaa
1201 gcaggtgagg gtgggctggg ctgaggccat tgccgccact atctgtgtaa taaaatccgt
1261 gagcacgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//