LOCUS BC007533 2232 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens neuropilin 1, mRNA (cDNA clone MGC:15383
IMAGE:2958475), complete cds.
ACCESSION BC007533
VERSION BC007533.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2232)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2232)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: b Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66864912.
FEATURES Location/Qualifiers
source 1..2232
/db_xref="H-InvDB:HIT000033282"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15383 IMAGE:2958475"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2232
/gene="NRP1"
/gene_synonym="CD304"
/gene_synonym="NRP"
/gene_synonym="VEGF165R"
/db_xref="GeneID:8829"
/db_xref="HGNC:HGNC:8004"
/db_xref="MIM:602069"
CDS 261..2195
/gene="NRP1"
/gene_synonym="CD304"
/gene_synonym="NRP"
/gene_synonym="VEGF165R"
/codon_start=1
/product="neuropilin 1"
/protein_id="AAH07533.1"
/db_xref="GeneID:8829"
/db_xref="HGNC:HGNC:8004"
/db_xref="MIM:602069"
/translation="MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGY
PHSYHPSEKCEWLIQAPDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGK
FCGKIAPPPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKS
PGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFP
DVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCM
EALGMESGEIHSDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGLLR
FVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVV
AVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDYPCSGMLGMVSGLISDSQITSS
NQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHREN
KVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFPALSTRFIRIYP
ERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLVDECDDDQANCHSGTGDDFQLTGGT
TVLATEKPTVIDSTIQSGIK"
BASE COUNT 621 a 546 c 558 g 507 t
ORIGIN
1 ggaagaggaa caagtgtggg aaaagggaga ggaagccgga gctaaatgac aggatgcagg
61 cgacttgaga cacaaaaaga gaagcgttcc tctcggatcc aggcattgcc tcgctgcttt
121 cttttctcca agacgggctg aggattgtac agctctaggc ggagttgggg ctcttcggat
181 cgcttagatt ctcctctttg ctgcatttcc ccccacgtcc tcgttctccc gcgtctgcct
241 gcggacccgg agaagggaga atggagaggg ggctgccgct cctctgcgcc gtgctcgccc
301 tcgtcctcgc cccggccggc gcttttcgca acgataaatg tggcgatact ataaaaattg
361 aaagccccgg gtaccttaca tctcctggtt atcctcattc ttatcaccca agtgaaaaat
421 gcgaatggct gattcaggct ccggacccat accagagaat tatgatcaac ttcaaccctc
481 acttcgattt ggaggacaga gactgcaagt atgactacgt ggaagtcttc gatggagaaa
541 atgaaaatgg acattttagg ggaaagttct gtggaaagat agcccctcct cctgttgtgt
601 cttcagggcc atttcttttt atcaaatttg tctctgacta cgaaacacat ggtgcaggat
661 tttccatacg ttatgaaatt ttcaagagag gtcctgaatg ttcccagaac tacacaacac
721 ctagtggagt gataaagtcc cccggattcc ctgaaaaata tcccaacagc cttgaatgca
781 cttatattgt ctttgcgcca aagatgtcag agattatcct ggaatttgaa agctttgacc
841 tggagcctga ctcaaatcct ccagggggga tgttctgtcg ctacgaccgg ctagaaatct
901 gggatggatt ccctgatgtt ggccctcaca ttgggcgtta ctgtggacag aaaacaccag
961 gtcgaatccg atcctcatcg ggcattctct ccatggtttt ttacaccgac agcgcgatag
1021 caaaagaagg tttctcagca aactacagtg tcttgcagag cagtgtctca gaagatttca
1081 aatgtatgga agctctgggc atggaatcag gagaaattca ttctgaccag atcacagctt
1141 cttcccagta tagcaccaac tggtctgcag agcgctcccg cctgaactac cctgagaatg
1201 ggtggactcc cggagaggat tcctaccgag agtggataca ggtagacttg ggccttctgc
1261 gctttgtcac ggctgtcggg acacagggcg ccatttcaaa agaaaccaag aagaaatatt
1321 atgtcaagac ttacaagatc gacgttagct ccaacgggga agactggatc accataaaag
1381 aaggaaacaa acctgttctc tttcagggaa acaccaaccc cacagatgtt gtggttgcag
1441 tattccccaa accactgata actcgatttg tccgaatcaa gcctgcaact tgggaaactg
1501 gcatatctat gagatttgaa gtatacggtt gcaagataac agattatcct tgctctggaa
1561 tgttgggtat ggtgtctgga cttatttctg actcccagat cacatcatcc aaccaagggg
1621 acagaaactg gatgcctgaa aacatccgcc tggtaaccag tcgctctggc tgggcacttc
1681 cacccgcacc tcattcctac atcaatgagt ggctccaaat agacctgggg gaggagaaga
1741 tcgtgagggg catcatcatt cagggtggga agcaccgaga gaacaaggtg ttcatgagga
1801 agttcaagat cgggtacagc aacaacggct cggactggaa gatgatcatg gatgacagca
1861 aacgcaaggc gaagtctttt gagggcaaca acaactatga tacacctgag ctgcggactt
1921 ttccagctct ctccacgcga ttcatcagga tctaccccga gagagccact catggcggac
1981 tggggctcag aatggagctg ctgggctgtg aagtggaagc ccctacagct ggaccgacca
2041 ctcccaacgg gaacttggtg gatgaatgtg atgacgacca ggccaactgc cacagtggaa
2101 caggtgatga cttccagctc acaggtggca ccactgtgct ggccacagaa aagcccacgg
2161 tcatagacag caccatacaa tcaggtatca aataaaatac gaaatgtgac aaaaaaaaaa
2221 aaaaaaaaaa aa
//