LOCUS BC007519 1003 bp mRNA linear HUM 23-JUN-2006
DEFINITION Homo sapiens OTU domain, ubiquitin aldehyde binding 1, mRNA (cDNA
clone MGC:4584 IMAGE:3051266), complete cds.
ACCESSION BC007519
VERSION BC007519.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1003)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1003)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC007519.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923113.
FEATURES Location/Qualifiers
source 1..1003
/db_xref="H-InvDB:HIT000033272"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4584 IMAGE:3051266"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1003
/gene="OTUB1"
/gene_synonym="FLJ20113"
/gene_synonym="FLJ40710"
/gene_synonym="HSPC263"
/gene_synonym="MGC4584"
/gene_synonym="OTB1"
/gene_synonym="OTU1"
/db_xref="GeneID:55611"
/db_xref="HGNC:HGNC:23077"
/db_xref="MIM:608337"
CDS 9..824
/gene="OTUB1"
/gene_synonym="FLJ20113"
/gene_synonym="FLJ40710"
/gene_synonym="HSPC263"
/gene_synonym="MGC4584"
/gene_synonym="OTB1"
/gene_synonym="OTU1"
/codon_start=1
/product="OTU domain, ubiquitin aldehyde binding 1"
/protein_id="AAH07519.1"
/db_xref="GeneID:55611"
/db_xref="HGNC:HGNC:23077"
/db_xref="MIM:608337"
/translation="MAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQ
NPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLE
ALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADLLA
SFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHI
HIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEGSEPKVYLLYRPGHYDILYK"
BASE COUNT 243 a 283 c 269 g 208 t
ORIGIN
1 gtttaaagat ggcggcggag gaacctcagc agcagaagca ggagccgctg ggcagcgact
61 ccgaaggtgt taactgtctg gcctatgatg aagccatcat ggctcagcag gaccgaattc
121 agcaagagat tgctgtgcag aaccctctgg tgtcagagcg gctggagctc tcggtcctat
181 acaaggagta tgctgaagat gacaacatct atcaacagaa gatcaaggac ctccacaaaa
241 agtactcgta catccgcaag accaggcctg acggcaactg tttctatcgg gctttcggat
301 tctcccactt ggaggcactg ctggatgaca gcaaggagtt gcagcggttc aaggctgtgt
361 ctgccaagag caaggaagac ctggtgtccc agggcttcac tgaattcaca attgaggatt
421 tccacaacac gttcatggac ctgattgagc aggtggagaa gcagacctct gtcgccgacc
481 tgctggcctc cttcaatgac cagagcacct ccgactacct tgtggtctac ctgcggctgc
541 tcacctcggg ctacctgcag cgcgagagca agttcttcga gcacttcatc gagggtggac
601 ggactgtcaa ggagttctgc cagcaggagg tggagcccat gtgcaaggag agcgaccaca
661 tccacatcat tgcgctggcc caggccctca gcgtgtccat ccaggtggag tacatggacc
721 gcggcgaggg cggcaccacc aatccgcaca tcttccctga gggctccgag cccaaggtct
781 accttctcta ccggcctgga cactacgata tcctctacaa atagggctgg ctccagcccg
841 ctgctgccct gctgcccccc tctgccaggc gctagacatg tacagaggtt tttctgtggt
901 tgtaaatggt cctatttcac ccccttcttc ctgtcacatg accccccccc atgttttatt
961 aaagggggtg ctggtggtga aaaaaaaaaa aaaaaaaaaa aaa
//