LOCUS BC007504 2277 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine-rich repeats and calponin homology (CH) domain
containing 3, mRNA (cDNA clone MGC:4126 IMAGE:2960711), complete
cds.
ACCESSION BC007504
VERSION BC007504.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2277)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2277)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC007504.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: c Column: 17.
FEATURES Location/Qualifiers
source 1..2277
/db_xref="H-InvDB:HIT000033258"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4126 IMAGE:2960711"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2277
/gene="LRCH3"
/gene_synonym="MGC4126"
/db_xref="GeneID:84859"
/db_xref="HGNC:HGNC:28637"
CDS 6..2144
/gene="LRCH3"
/gene_synonym="MGC4126"
/codon_start=1
/product="leucine-rich repeats and calponin homology (CH)
domain containing 3"
/protein_id="AAH07504.1"
/db_xref="GeneID:84859"
/db_xref="HGNC:HGNC:28637"
/translation="MAAAGLVAVAAAAEYSGTVASGGNLPGVHCGPSSGAGPGFGPGS
WSRSLDRALEEAAVTGVLSLSGRKLREFPRGAANHDLTDTTRADLSRNRLSEIPIEAC
HFVSLENLNLYQNCIRYIPEAILNLQALTFLNISRNQLSTLPVHLCNLPLKVLIASNN
KLVSLPEEIGHLRHLMELDVSCNEIQTIPSQIGNLEALRDLNVRRNHLVHLPEELAEL
PLIRLDFSCNKITTIPVCYRNLRHLQTITLDNNPLQSPPAQICIKGKVHIFKYLNIQA
CKIAPDLPDYDRRPLGFGSCHEELYSSRPYGALDSGFNSVDSGDKRWSGNEPTDEFSD
LPLRVAEITKEQRLRRESQYQENRGSLVVTNGGVEHDLDQIDYIDSCTAEEEEAEVRQ
PKGPDPDSLSSQFMAYIEQRRISHEGSPVKPVAIREFQKTEDMRRYLHQNRVPAEPSS
LLSLSASHNQLSHTDLELHQRREQLVERTRREAQLAALQYEEEKIRTKQIQRDAVLDF
VKQKASQSPQKQHPLLDGVDGECPFPSRRSQHTDDSALCMSLSGLNQVGCAATLPHSS
AFTPLKSDDRPNALLSSPATETVHHSPAYSFPAAIQRNQPQRPESFLFRAGVRAETNK
GHASPLPPSAAPTTDSTDSITGQNSRQREEELELIDQLRKHIEYRLKVSLPCDLGAAL
TDGVVLCHLANHVRPRSVPSIHVPSPAVVS"
BASE COUNT 657 a 547 c 532 g 541 t
ORIGIN
1 gggaaatggc ggccgcgggc ttggtcgctg tggcagcggc tgccgagtac tctggcacgg
61 tagcgtcggg aggtaacctc cctggtgttc actgcggccc aagctccggg gcaggccctg
121 gttttggccc gggctcgtgg agccgctctc tcgatcgagc cctggaggag gcggcggtca
181 ctggggtgct gagcctgagc ggccggaaac tgagggagtt tccccgggga gcggccaacc
241 acgacctgac ggacaccacc cgggcggacc tgtcgcgaaa tcgcctttca gaaattccta
301 tagaagcatg tcactttgtt tctctggaaa atctcaactt gtaccaaaat tgtattcgtt
361 atattccaga ggcaatttta aacctacaag ctctaacatt cttaaatatt agtcggaacc
421 aactgtcaac attgccggta cacttgtgta atttgccatt gaaagtctta attgctagta
481 ataacaaatt ggtgtcactt ccagaagaaa ttggacacct tagacatttg atggaacttg
541 atgtgagctg caatgaaatt caaactatac cttcccaaat tggtaacctg gaggccttga
601 gagaccttaa tgtaagaaga aatcacctag tacatttgcc tgaagagctg gcggagttgc
661 ctttgatacg gttagacttc tcatgcaata aaattaccac aatccctgtt tgttatcgga
721 acctcaggca cctacagacg atcaccctag ataacaatcc actacaatca cctcctgcac
781 agatatgtat aaaaggcaaa gtccacatat ttaaatacct gaacatacaa gcttgtaaga
841 ttgctccaga tctgccggat tatgatagga gaccgttggg ttttggctcc tgccatgaag
901 aactgtactc aagtcgccct tatggagccc ttgattcagg cttcaatagt gtggacagtg
961 gtgataagag atggtcaggg aatgaaccta cagatgaatt ttcagatctg cctcttcgag
1021 tagcagagat tactaaagaa caaagactac gaagagaaag ccagtaccaa gagaaccgcg
1081 gcagtttggt agtaacaaac ggcggagtgg aacatgatct ggatcagatt gactacatag
1141 acagctgcac cgcagaggaa gaggaggccg aggtgagaca gcccaaggga ccagacccag
1201 acagccttag ttcacagttt atggcgtata ttgaacagcg gcgaatctct catgagggtt
1261 caccagtaaa gccagtagcc attagggagt ttcaaaaaac agaagatatg agaagatact
1321 tacatcaaaa cagggttcca gctgagccat cttccctcct gtcactatca gcaagtcaca
1381 atcagctgtc acacacagac ctggaacttc atcagagaag ggagcagtta gtagagcgca
1441 ctcggagaga ggctcagctt gctgccctgc agtatgagga ggagaaaata aggaccaagc
1501 agatccagag agatgctgtc ctggactttg tcaaacaaaa agcatcacaa agtccacaaa
1561 aacagcaccc gctcctagat ggcgtagatg gtgagtgccc cttcccatcc agaaggtctc
1621 agcacactga tgatagtgcc ttgtgcatgt cgctgtcagg gttgaatcaa gtgggctgtg
1681 ctgctaccct gcctcattct tctgccttca cgcctcttaa gagtgatgac agacctaatg
1741 ctctattaag ttcacctgca acagaaacag ttcatcattc ccctgcatat tcttttcctg
1801 ctgctatcca gagaaatcag cctcagcgcc ctgaaagctt ccttttccga gcaggtgtca
1861 gggcagaaac caacaaaggt catgcttcac cccttcctcc atctgctgca cctaccactg
1921 attctacaga ttccataaca ggacagaatt caagacagag agaagaagag ctggaattaa
1981 tagaccaact gcgtaaacat attgagtacc ggttgaaagt gtctctacct tgtgatctcg
2041 gagcagctct aactgacggt gttgttcttt gccatttggc caatcatgtg cgacctcgat
2101 ctgtcccaag cattcatgtt ccctcaccag ctgtagtaag ttgataatcc taaaaagcct
2161 tggctattca tcagacattt gttaagcaca gtggacagac atttcttaag cattgtgcta
2221 gatattaagg atacagatat aaagagtcca gtctctacaa aaaaaaaaaa aaaaaaa
//