LOCUS BC007501 1641 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens protein-L-isoaspartate (D-aspartate)
O-methyltransferase, mRNA (cDNA clone MGC:3902 IMAGE:3010742),
complete cds.
ACCESSION BC007501
VERSION BC007501.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1641)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1641)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007501.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: o Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885538.
FEATURES Location/Qualifiers
source 1..1641
/db_xref="H-InvDB:HIT000033255"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3902 IMAGE:3010742"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1641
/gene="PCMT1"
/db_xref="GeneID:5110"
/db_xref="MIM:176851"
CDS 150..836
/gene="PCMT1"
/codon_start=1
/product="PCMT1 protein"
/protein_id="AAH07501.1"
/db_xref="GeneID:5110"
/db_xref="MIM:176851"
/translation="MAWKSGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN
PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGC
TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGA
AAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTD
KEKQWSRDEL"
misc_feature 171..812
/gene="PCMT1"
/note="PCMT; Region: Protein-L-isoaspartate(D-aspartate)
O-methyltransferase (PCMT)"
/db_xref="CDD:pfam01135"
BASE COUNT 484 a 293 c 385 g 479 t
ORIGIN
1 gcggcggcga cggcagtaac agcggcagct acagcgggga cgcgagcggg gcggtgacgg
61 tgtgggaggt ggtctcactc ttgggaaaac tgctgggcac cgtcgtcgcg ctgaaggtgg
121 ttctgtacct gctccgagtg tgcttagcga tggcctggaa atccggcggc gccagccact
181 cggagctaat ccacaatctc cgcaaaaatg gaatcatcaa gacagataaa gtatttgaag
241 tgatgctggc tacagaccgc tcccactatg caaaatgtaa cccatacatg gattctccac
301 aatcaatagg tttccaagca acaatcagtg ctccacacat gcatgcatat gcgctagaac
361 ttctatttga tcagttgcat gaaggagcta aagctcttga tgtaggatct ggaagtggaa
421 tccttactgc atgttttgca cgtatggttg gatgtactgg aaaagtcata ggaattgatc
481 acattaaaga gctagtagat gactcagtaa ataatgtcag gaaggacgat ccaacacttc
541 tgtcttcagg gagagtacag cttgttgtgg gggatggaag aatgggatat gctgaagaag
601 ccccttatga tgccattcat gtgggagctg cagcccctgt tgtaccccag gcgctaatag
661 atcagttaaa gcccggagga agattgatat tgcctgttgg tcctgcaggc ggaaaccaaa
721 tgttggagca gtatgacaag ctacaagatg gcagcatcaa aatgaagcct ctgatggggg
781 tgatatacgt gcctttaaca gataaagaaa agcagtggtc cagggatgaa ttgtaaaagc
841 aacatcagct tgaccagtat aaaattacag tggattgctc atctcagtcc tcaaagcttt
901 ttgaaaacca acaccatcac agcttgtttt ggactttgtt acactgttat tttcagcatg
961 aaaatgtgtg tttttttagg gtttctgatt cttcaaagag gcacagagcc aaattggtag
1021 aggaaggatg caaagtataa atttgtgtaa tattacttta acatgcccat attttacttg
1081 gaaatattaa aagaaagggt tctgtaaaat ggaaaactta gtttgtgaat tgattttgag
1141 gagtggtttt tcttttcttg gacacttaat tctgttctga tattaattta tcagattgct
1201 tttgtgcatt ggataacacc accattcaca agttaagatt cttggtattt ggatatctgt
1261 tagatgctac taagaaaata gagatgagct ttctttttaa agcttttgat gtggtgtcat
1321 agaatagcat gttgtagata caatcagctg ctttgttacc ttaaaactag gcatttgtaa
1381 atattaaacc ataagatggc aggtgatgtc ctgtaaacac tcagctgttc agattggaca
1441 taactgactt agttcttccc ttctctctct ctcaaaatta taggagactt gtagtttagt
1501 gtggttttct gtttctaatt tgctgctgat aatgtatatg aacttaacat gctgtgtaag
1561 ctgtgtccta gttcttgaac agtttatgca gtgctgcttt gccaaataaa gttaaaagta
1621 aaaaaaaaaa aaaaaaaaaa a
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