LOCUS BC007455 1244 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens SH3-domain GRB2-like endophilin B1, mRNA (cDNA clone
MGC:901 IMAGE:2988769), complete cds.
ACCESSION BC007455
VERSION BC007455.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1244)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1244)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC007455.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: c Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359904.
FEATURES Location/Qualifiers
source 1..1244
/db_xref="H-InvDB:HIT000033236"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:901 IMAGE:2988769"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1244
/gene="SH3GLB1"
/gene_synonym="Bif-1"
/gene_synonym="CGI-61"
/gene_synonym="dJ612B15.2"
/gene_synonym="KIAA0491"
/db_xref="GeneID:51100"
/db_xref="HGNC:HGNC:10833"
/db_xref="MIM:609287"
CDS 46..1143
/gene="SH3GLB1"
/gene_synonym="Bif-1"
/gene_synonym="CGI-61"
/gene_synonym="dJ612B15.2"
/gene_synonym="KIAA0491"
/codon_start=1
/product="SH3-domain GRB2-like endophilin B1"
/protein_id="AAH07455.1"
/db_xref="GeneID:51100"
/db_xref="HGNC:HGNC:10833"
/db_xref="MIM:609287"
/translation="MNIMDFNVKKLAADAGTFLSRAVQFTEEKLGQAEKTELDAHLEN
LLSKAECTKIWTEKIMKQTEVLLQPNPNARIEEFVYEKLDRKAPSRINNPELLGQYMI
DAGTEFGPGTAYGNALIKCGETQKRIGTADRELIQTSALNFLTPLRNFIEGDYKTIAK
ERKLLQNKRLDLDAAKTRLKKAKAAETRNSSEQELRITQSEFDRQAEITRLLLEGISS
THAHHLRCLNDFVEAQMTYYAQCYQYMLDLQKQLGSFPSNYLSNNNQTSVTPVPSVLP
NAIGSSAMASTSGLVITSPSNLSDLKECSGSRKARVLYDYDAANSTELSLLADEVITV
FSVVGMDSDWLMGERGNQKGKVPITYLELLN"
BASE COUNT 425 a 248 c 273 g 298 t
ORIGIN
1 ctcgccgccg ctaggtcggc cggctccgcc cggctgccgc ctaggatgaa tatcatggac
61 ttcaacgtga agaagctggc ggccgacgca ggcaccttcc tcagtcgcgc cgtgcagttc
121 acagaagaaa agcttggcca ggctgagaag acagaattgg atgctcactt agagaacctc
181 cttagcaaag ctgaatgtac caaaatatgg acagaaaaaa taatgaaaca aactgaagtg
241 ttattgcagc caaatccaaa tgccaggata gaagaatttg tttatgagaa actggataga
301 aaagctccaa gtcgtataaa caacccagaa cttttgggac aatatatgat tgatgcaggg
361 actgagtttg gcccaggaac agcttatggt aatgccctta ttaaatgtgg agaaacccaa
421 aaaagaattg gaacagcaga cagagaactg attcaaacgt cagccttaaa ttttcttact
481 cctttaagaa actttataga aggagattac aaaacaattg ctaaagaaag gaaactattg
541 caaaataaga gactggattt ggatgctgca aaaacgagac taaaaaaggc aaaagctgca
601 gaaactagaa attcatctga acaggaatta agaataactc aaagtgaatt tgatcgtcaa
661 gcagagatta ccagacttct gctagaggga atcagcagta cacatgccca tcaccttcgc
721 tgtctgaatg actttgtaga agcccagatg acttactatg cacagtgtta ccagtatatg
781 ttggacctcc agaaacaact gggaagtttt ccatccaatt atcttagtaa caacaatcag
841 acttctgtga cacctgtacc atcagtttta ccaaatgcga ttggttcttc tgccatggct
901 tcaacaagtg gcctagtaat cacctctcct tccaacctca gtgaccttaa ggagtgtagt
961 ggcagcagaa aggccagggt tctctatgat tatgatgcag caaacagtac tgaattatca
1021 cttctggcag atgaggtgat cactgtgttc agtgttgttg gaatggattc agactggcta
1081 atgggggaaa ggggaaacca gaagggcaag gtgccaatta cctacttaga actgctcaat
1141 taagtaggtg gactatggaa aggttgccca tcatgacttt gtatttatat acaattaact
1201 ctaaataaag caggttaagt atcttcaaaa aaaaaaaaaa aaaa
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