LOCUS BC007408 2418 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens low density lipoprotein receptor-related protein 3,
mRNA (cDNA clone MGC:2428 IMAGE:3009711), complete cds.
ACCESSION BC007408
VERSION BC007408.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2418)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2418)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC007408.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: k Column: 22.
FEATURES Location/Qualifiers
source 1..2418
/db_xref="H-InvDB:HIT000033197"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2428 IMAGE:3009711"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2418
/gene="LRP3"
/db_xref="GeneID:4037"
/db_xref="HGNC:HGNC:6695"
/db_xref="MIM:603159"
CDS 23..2335
/gene="LRP3"
/codon_start=1
/product="low density lipoprotein receptor-related protein
3"
/protein_id="AAH07408.1"
/db_xref="GeneID:4037"
/db_xref="HGNC:HGNC:6695"
/db_xref="MIM:603159"
/translation="MEKRAAAGLEGAPGARAQLAVVCLVNIFLTGRLSSAVPALAACS
GKLEQHTERRGVIYSPAWPLNYPPGTNCSWYIQGDRGDMITISFRNFDVEESHQCSLD
WLLLGPAAPPRQEAFRLCGSAIPPAFISARDHVWIFFHSDASSSGQAQGFRLSYIRGK
LGQASCQADEFRCDNGKCLPGPWQCNTVDECGDGSDEGNCSAPASEPPGSLCPGGTFP
CSGARSTRCLPVERRCDGLQDCGDGSDEAGCPDLACGRRLGSFYGSFASPDLFGAARG
PSDLHCTWLVDTQDSRRVLLQLELRLGYDDYVQVYEGLGERGDRLLQTLSYRSNHRPV
SLEAAQGRLTVAYHARARSAGHGFNATYQVKGYCLPWEQPCGSSSDSDGGSLGDQGCF
SEPQRCDGWWHCASGRDEQGCPACPPDQYPCEGGSGLCYTPADRCNNQKSCPDGADEK
NCFSCQPGTFHCGTNLCIFETWRCDGQEDCQDGSDEHGCLAAVPRKVITAALIGSLVC
GLLLVIALGCAFKLYSLRTQEYRAFETQMTRLEAEFVRREAPPSYGQLIAQGLIPPVE
DFPVYSASQASVLQNLRTAMRRQMRRHASRRGPSRRRLGRLWNRLFHRPRAPRGQIPL
LTAARPSQTVLGDGFLQPAPGAAPDPPAPLMDTGSTRAAGDRPPSAPGRAPEVGPSGP
PLPSGLRDPECRPVDKDRKVCREPLADGPAPADAPREPCSAQDPHPQVSTASSTLGPH
SPEPLGVCRNPPPPCSPMLEASDDEALLVC"
BASE COUNT 389 a 874 c 778 g 377 t
ORIGIN
1 cccgcgggcg gccgggcccg gcatggagaa gcgcgcggcc gcggggctgg agggcgcgcc
61 gggcgcccgg gcgcagctgg ccgtcgtctg tctggtgaac atctttctca ccgggagact
121 cagcagtgcg gttcctgcct tagcggcctg cagtgggaag ctggagcagc acacggagcg
181 gcgtggggtc atctacagcc cggcctggcc cctcaactac ccgccaggca ccaactgcag
241 ctggtacatc cagggcgacc gtggtgacat gattaccatc agcttccgca actttgacgt
301 ggaggagtcc caccagtgct ccctggactg gctcctgctg ggcccagcag ccccaccccg
361 ccaggaggcc ttccgcctct gtggctccgc catcccacct gccttcatct ctgcccgcga
421 ccatgtctgg attttcttcc actcagacgc ctccagctcc ggccaggccc agggcttccg
481 tctgtcttac atccgaggga agctgggcca ggcatcctgc caggcagatg agttccgctg
541 tgacaacggc aagtgcctgc ccggcccgtg gcagtgcaac acggtggacg agtgtggaga
601 cggctctgat gagggcaact gctcggcgcc cgcctccgag cctccaggca gcctgtgccc
661 cggggggacc ttcccatgca gcggggcgcg ctccacgcgc tgcctgcctg tggagcggcg
721 ctgtgacggc ttgcaggact gcggcgacgg ctcggatgag gcgggctgcc ccgacctggc
781 gtgcggccgg cggctgggca gcttctacgg ctcctttgcc tccccagacc tgttcggcgc
841 cgctcgcggg ccctcagacc ttcactgcac gtggctggtg gacacacagg actcccggcg
901 ggtgctgctg cagctggaac tgcggctggg ctatgacgac tacgtgcagg tatacgaggg
961 cctgggcgag cgcggggacc gcctgctgca gacgctgtcc taccgcagca accaccggcc
1021 cgtgagcctg gaggccgccc agggccgcct caccgtggcc taccacgcgc gcgcccgcag
1081 cgccggccac ggcttcaatg ccacctacca ggtgaagggc tattgcctcc cctgggagca
1141 gccgtgcggg agcagtagtg acagtgacgg gggcagcctg ggcgaccagg gctgcttctc
1201 agagccacag cgctgtgatg gctggtggca ttgtgccagc ggccgagacg agcagggctg
1261 ccctgcctgc ccgcccgacc agtacccctg cgagggtggc agtggtctgt gctacacgcc
1321 tgccgaccgc tgcaacaacc agaaaagctg tcccgacggc gccgacgaga agaactgctt
1381 ctcctgccag cccggcacct tccactgcgg taccaacctg tgcatcttcg agacgtggcg
1441 ctgtgacggc caggaagact gccaggacgg cagcgatgag catgggtgcc tggccgccgt
1501 gccccgcaag gtcatcacgg cggcgctcat tggcagcctg gtgtgtggcc tgctgctggt
1561 catcgcgctg ggctgcgcct tcaagctcta ctcactgcgc acgcaggaat acagggcctt
1621 cgagacccag atgacgcgcc tggaggctga gttcgtgcgg cgggaggcac ccccatccta
1681 tggtcagctc atcgcccagg gcctcattcc acccgtggag gactttcctg tctacagtgc
1741 gtcccaggcc tctgtgctgc agaatcttcg cacagccatg cggagacaga tgcgtcggca
1801 cgcctcccgc cgggggccct cccgccgccg cctcggccgc ctctggaacc ggctctttca
1861 ccggccgcgg gcgccccgag gccagatccc actgctgacc gcagcacgcc cctcacagac
1921 cgtgctgggc gatggcttcc tccagcctgc tccaggggct gcccccgacc ccccagcacc
1981 gctcatggac acaggcagca ccagggcggc cggagacagg ccccccagtg cccccggccg
2041 tgcaccggag gtgggacctt cagggccacc cttgccctcg ggcctgcgag acccagagtg
2101 caggcccgtg gacaaggaca gaaaggtctg cagggagcca ctggcagacg gcccagctcc
2161 tgcagatgca cctcgggagc cctgctcagc ccaggacccg cacccccagg tctccactgc
2221 cagcagcacc ctgggccccc actcgccaga gccactgggg gtctgcagga accccccgcc
2281 cccctgctcc ccaatgctgg aggccagcga tgatgaggcc ctgttggtct gttgaccgct
2341 gggctcgctg gtgaccgcca cagccccgct ttgtaaccag ggaatacaca gtcatttcta
2401 aaaaaaaaaa aaaaaaaa
//