LOCUS BC007359 965 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens rotatin, mRNA (cDNA clone IMAGE:3622437), partial cds.
ACCESSION BC007359
VERSION BC007359.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 965)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 965)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007359.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: k Column: 17.
FEATURES Location/Qualifiers
source 1..965
/db_xref="H-InvDB:HIT000086801"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3622437"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..965
/gene="RTTN"
/gene_synonym="DKFZP434G145"
/gene_synonym="FLJ39085"
/db_xref="GeneID:25914"
CDS <1..604
/gene="RTTN"
/gene_synonym="DKFZP434G145"
/gene_synonym="FLJ39085"
/codon_start=2
/product="RTTN protein"
/protein_id="AAH07359.2"
/db_xref="GeneID:25914"
/translation="TVQQMVFMLLSNLALSHDCKGVIQKSNFLQNFLSLALPKGGNKH
LSNLTILWLKLLLNISSGEDGQQMILRLDGCLDLLTEMSKYKHKSSPLLPLLIFHNVC
FSPANKPKILANEKVITVLAACLESENQNAQRIGAAALWALIYNYQKAKTALKSPSVK
RRVDEAYSLAKKTFPNSEANPLNAYYLKCLENLVQLLNSS"
BASE COUNT 308 a 199 c 182 g 276 t
ORIGIN
1 cacggttcag cagatggttt ttatgcttct ttcaaacctg gccttgtcgc atgactgtaa
61 aggagtaatt cagaagagta acttcttaca gaacttcctc tctctagcat tgccaaaagg
121 aggaaataaa catctaagta atctgactat tctttggttg aagttactcc tgaatatatc
181 atctggagaa gatgggcaac aaatgattct gaggcttgat ggctgtctag acttactaac
241 agagatgagc aaatacaagc acaagagcag ccctttattg cctcttctta tctttcataa
301 tgtttgcttc agtcctgcaa ataaacccaa gatcctggct aatgaaaaag tcattactgt
361 gcttgctgcc tgtctggaaa gtgagaatca aaatgctcag aggattggag cagctgccct
421 ttgggctctg atttacaatt atcagaaggc aaaaacagct ttgaaaagcc catcagtaaa
481 aagaagagtg gatgaagcat actccttagc aaagaaaact ttcccaaact cagaagcaaa
541 ccctctaaat gcctattatt tgaaatgtct tgaaaacctc gtgcagctcc ttaattcttc
601 ctgagtgcca tgggatgcta caccttgaag ctgacagtca tcaacagggg agctaaagtt
661 gaagccagct gtgtgtagca gctgttacct gaagacgtgc tacctctcta caaagtgttg
721 atccccttct ttcccatgag agagagaact ggtgatactc caacaccgtc cagttgtggc
781 agctctccag aagtaatagc agctgacaac tttctgtgcc ttttcctttc tgttgaaaag
841 gcatagaaag ttctgggaac ataaacattt ttaccctttt ctatgccatt tattttgtaa
901 aaatcctatt taacagttat ttaataaaac aatattttta gaaactaaaa aaaaaaaaaa
961 aaaaa
//