LOCUS BC007308 822 bp mRNA linear HUM 07-JUN-2004
DEFINITION Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone
IMAGE:3352599), partial cds.
ACCESSION BC007308
VERSION BC007308.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 822)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 822)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: o Column: 15.
FEATURES Location/Qualifiers
source 1..822
/db_xref="H-InvDB:HIT000033135"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3352599"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..822
/gene="RPS4X"
/gene_synonym="CCG2"
/gene_synonym="DXS306"
/gene_synonym="SCAR"
/gene_synonym="SCR10"
/db_xref="GeneID:6191"
/db_xref="MIM:312760"
CDS <1..732
/gene="RPS4X"
/gene_synonym="CCG2"
/gene_synonym="DXS306"
/gene_synonym="SCAR"
/gene_synonym="SCR10"
/codon_start=1
/product="RPS4X protein"
/protein_id="AAH07308.2"
/db_xref="GeneID:6191"
/db_xref="MIM:312760"
/translation="DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKI
CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYK
LCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL
CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISL
PRGKGIRLTIAEERDKRLAAKQSSG"
BASE COUNT 250 a 178 c 195 g 199 t
ORIGIN
1 gataaattga ccggtgtgtt tgctcctcgt ccatccaccg gtccccacaa gttgagagag
61 tgtctccccc tcatcatttt cctgaggaac agacttaagt atgccctgac aggagatgaa
121 gtaaagaaga tttgcatgca gcggttcatt aaaatcgatg gcaaggtccg aactgatata
181 acctaccctg ctggattcat ggatgtcatc agcattgaca agacgggaga gaatttccgt
241 ctgatctatg acaccaaggg tcgctttgct gtacatcgta ttacacctga ggaggccaag
301 tacaagttgt gcaaagtgag aaagatcttt gtgggcacaa aaggaatccc tcatctggtg
361 actcatgatg cccgcaccat ccgctacccc gatcccctca tcaaggtgaa tgataccatt
421 cagattgatt tagagactgg caagattact gatttcatca agttcgacac tggtaacctg
481 tgtatggtga ctggaggtgc taacctagga agaattggtg tgatcaccaa cagagagagg
541 caccctggat cttttgacgt ggttcacgtg aaagatgcca atggcaacag ctttgccact
601 cgactttcca acatttttgt tattggcaag ggcaacaaac catggatttc tcttccccga
661 ggaaagggta tccgcctcac cattgctgaa gagagagaca aaagactggc ggccaaacag
721 agcagtgggt gaaatgggtc cctgggtgac atgtcagatc tttgtacgta attaaaaata
781 ttgtggcagg attaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//