LOCUS BC007296 1901 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens kelch domain containing 3, mRNA (cDNA clone MGC:15673
IMAGE:3349731), complete cds.
ACCESSION BC007296
VERSION BC007296.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1901)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1901)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17149812.
FEATURES Location/Qualifiers
source 1..1901
/db_xref="H-InvDB:HIT000033127"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15673 IMAGE:3349731"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1901
/gene="KLHDC3"
/gene_synonym="dJ20C7.3"
/gene_synonym="hPeas"
/gene_synonym="PEAS"
/gene_synonym="RP1-20C7.3"
/db_xref="GeneID:116138"
/db_xref="HGNC:HGNC:20704"
CDS 156..1304
/gene="KLHDC3"
/gene_synonym="dJ20C7.3"
/gene_synonym="hPeas"
/gene_synonym="PEAS"
/gene_synonym="RP1-20C7.3"
/codon_start=1
/product="kelch domain containing 3"
/protein_id="AAH07296.1"
/db_xref="GeneID:116138"
/db_xref="HGNC:HGNC:20704"
/translation="MLRWTVHLEGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQI
DVHIFNAVSLRWTKLPPVKSAIRGQAPVVPYMRYGHSTVLIDDTVLLWGGRNDTEGAC
NVLYAFDVNTHKWFTPRVSGTVPGARDGHSACVLGKIMYIFGGYEQQADCFSNDIHKL
DTSTMTWTLICTKGSPARWRDFHSATMLGSHMYVFGGRADRFGPFHSNNEIYCNRIRV
FDTRTEAWLDCPPTPVLPEGRRSHSAFGYNGELYIFGGYNARLNRHFHDLWKFNPVSF
TWKKIEPKGKGPCPRRRQCCCIVGDKIVLFGGTSPSPEEGLGDEFDLIDHSDLHILDF
SPSLKTLCKLAVIQYNLDQSCLPHDIRWELNAMTTNSNISRPIVSSHG"
BASE COUNT 403 a 523 c 531 g 444 t
ORIGIN
1 atctcgttgg ggactaaggc gtcggttggc gcgcaacggg ttctaggctg caggcagctc
61 gaggacccgc ggccccgccc cggctcggcc tggcagatag cagaggcagc aggccgtgcc
121 gggggggcat gttgctgtaa ccagtggccc aggggatgtt acggtggaca gtgcacctgg
181 agggcgggcc ccgcagggtg aaccatgctg cagtggctgt cgggcatcgg gtatactcct
241 tcgggggtta ctgctctggt gaagactatg agacactgcg tcagatagat gtgcacattt
301 tcaatgcagt gtccttgcgt tggacaaagc tgcccccggt gaagtctgcc atccgtgggc
361 aagctcctgt ggtaccctac atgcgctatg gacactcaac cgtcctcatc gacgacacag
421 tcctcctttg gggcgggcgg aatgacaccg aaggggcctg caatgtgctc tatgcctttg
481 acgtcaatac gcacaagtgg ttcacacccc gagtgtcagg gacagttcct ggggcccggg
541 atggacattc agcctgtgtc ctaggcaaga tcatgtacat ttttgggggc tacgagcagc
601 aggcggactg tttttccaat gacattcaca agctagatac cagcaccatg acatggactc
661 ttatctgtac aaagggcagc cctgcacgct ggagggactt ccactcagcc acaatgctgg
721 gaagtcacat gtatgtcttt gggggccgtg ccgaccgctt tgggccattc cattccaaca
781 atgagattta ctgcaaccgc attcgagtct ttgacaccag aactgaggct tggctggact
841 gtcccccgac tccagtgctg cctgaggggc gccggagcca ctcggccttt ggctacaatg
901 gggagctgta catctttggt ggttataatg caaggctgaa ccggcacttc catgacctct
961 ggaagtttaa tcctgtgtcc tttacctgga aaaagattga accgaagggg aaggggccat
1021 gtccccgccg gcgccagtgc tgctgtattg ttggtgacaa gattgtcctc tttgggggta
1081 ccagtccatc tcctgaggaa ggcctgggag atgaatttga ccttatagat cattctgact
1141 tacacatttt ggactttagc cctagtctga agactctgtg caaactggcc gtgattcagt
1201 ataacctaga ccagtcctgt ttgcctcatg atatcaggtg ggagctgaat gccatgacca
1261 ccaacagcaa tatcagtcgc cccatcgtct cctcccatgg gtaggaggaa gtttctgcca
1321 cctcccctcc tgagcctgct gtcatcttca ctgcccctgc ccatctgtca cccacctgct
1381 cctttgaccc ctggacttgg tatacctcca tgtggagttg ttgggcgaga ggtgttctct
1441 gtgctgtgaa ttcagtgggg agctgtagcg gggtgggggc taggttcctc cccccttggg
1501 ccgagggccc cttccccttg gtgctctgtc cccatccacc tcctttcagc tgctcctggg
1561 cctcagctct gcccagggcc agccaggttc tgctgggaag ggaagggaat ggggagaagg
1621 gagaagcaag cagtgtctga gcctcaggag cttccccctc cccctttgcc tatcccctcc
1681 cctctgcttg agccttgagc cttgactggg agctgaaagg agttgcagct gttggcatga
1741 gacctccttc tccccgtctt ggggaggtgg ggaccagcag ataaatccca cccttccttg
1801 agctgtcgct gtactctgaa gttcagccag ctcagatttt ataaaaatta attaaaatct
1861 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//