LOCUS BC007294 2308 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens H2.0-like homeobox, mRNA (cDNA clone MGC:15670
IMAGE:3349581), complete cds.
ACCESSION BC007294
VERSION BC007294.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2308)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2308)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: m Column: 19.
FEATURES Location/Qualifiers
source 1..2308
/db_xref="H-InvDB:HIT000033125"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15670 IMAGE:3349581"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2308
/gene="HLX"
/gene_synonym="HB24"
/db_xref="GeneID:3142"
/db_xref="HGNC:HGNC:4978"
/db_xref="MIM:142995"
CDS 443..1909
/gene="HLX"
/gene_synonym="HB24"
/codon_start=1
/product="H2.0-like homeobox"
/protein_id="AAH07294.1"
/db_xref="GeneID:3142"
/db_xref="HGNC:HGNC:4978"
/db_xref="MIM:142995"
/translation="MFAAGLAPFYASNFSLWSAAYCSSAGPGGCSFPLDPAAVKKPSF
CIADILHAGVGDLGAAPEGLAGASAAALTAHLGSVHPHASFQAAARSPLRPTPVVAPS
EVPAGFPQRLSPLSAAYHHHHPQQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNP
HHSGSAPAPSSKDLKFGIDRILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQP
SAGQFFASLDPINEASAILSPLNSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKR
SWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHS
KEAQAQKDKDKEAGEKPSGGAPAADGEQDERSPSRSEGEAESESSDSESLDMAPSDTE
RTEGSERSLHQTTVIKAPVTGALITASSAGSGGSSGGGGNSFSFSSASSLSSSSTSAG
CASSLGGGGASELLPATQPTASSAPKSPEPAQGALGCL"
BASE COUNT 465 a 769 c 658 g 416 t
ORIGIN
1 ttagagacga gttttttttt tttttctatt acttttcccc ccccctaact aacggactat
61 tattgttgtt gttttaaatt tagctcttag ggcttagcta tttgggtttt cttgcggtgt
121 ccggctcccg tctccctggc tcccccgccc gccctgcggc cccagcgccc ctcgctctca
181 tccagcccgc gaggagtgcg ggcgccgcgc cgcctttaaa gcgaggccag ggagcgaggc
241 ggtgaccggc cgagatccgg ccctcgcctc ctccctcggt ggcgctaggg ctcccggcct
301 ctcttcctca gtgcgggcgg agaagcgaaa gcggatcgtc ctcggctgcc gccgccttct
361 ccgggactcg cgcgcccctc cccgcgcgcc cacccaccca gtccggctgg actgcggcag
421 ccgcgcggct caccccggca ggatgttcgc agccgggctg gctcccttct acgcctccaa
481 cttcagcctc tggtcggccg cttactgctc ctcggccggc ccaggcggct gctccttccc
541 cttggacccc gccgccgtca aaaagccctc cttctgcatc gcagacattc tgcacgccgg
601 cgtgggggat ctgggggcgg ccccggaggg cctggcaggg gcctcggccg ccgccctcac
661 cgcgcacttg ggctcggttc acccgcacgc ctctttccaa gcggcggcca gatccccgct
721 tcgacccacc ccagtggtgg cgccctccga agtcccggct ggcttcccgc agcggctgtc
781 tccgctctca gccgcctacc accaccatca cccgcaacaa caacagcagc agcaacagcc
841 gcagcagcaa cagcctccgc ctccgccccg ggctggcgcc ctgcagcccc cggcctcggg
901 gacgcgagtg gttccgaacc cccaccacag tggctctgcc ccggccccct ccagcaaaga
961 cctcaaattt ggaattgacc gcattttatc tgcagaattt gacccaaaag tcaaagaagg
1021 caacacgctg agagatctca cttccctgct aaccggtggg cggcccgccg gggtgcacct
1081 ctcaggcctg cagccctcgg ccggccagtt cttcgcatct ctagatccca ttaacgaggc
1141 ttctgcaatc ctgagtccct taaactcgaa cccaagaaat tcagttcagc atcagttcca
1201 agacacgttt ccaggtccct atgctgtgct cacgaaggac accatgccgc agacgtacaa
1261 aaggaagcgt tcatggtcgc gcgctgtgtt ctccaacctg cagaggaaag gcctggagaa
1321 aaggtttgag attcagaagt acgtgaccaa gccggaccga aagcagctgg cggcgatgct
1381 gggcctcacg gacgcacagg tgaaggtgtg gttccagaac cggcggatga agtggcggca
1441 ctccaaggag gcccaggccc aaaaggacaa ggacaaggag gctggcgaga agccatcagg
1501 tggagccccg gctgcggatg gcgagcagga cgagaggagc cccagccgtt ctgaaggcga
1561 ggctgagagc gagagcagcg actccgagtc cctggacatg gcccccagcg acacggagcg
1621 gactgagggg agtgagcgtt ctctgcacca aacaacagtt attaaggccc cggtcactgg
1681 cgccctcatt accgccagca gtgctgggag tggtgggagc agcggcggcg gcggcaatag
1741 tttcagcttc agcagcgcca gcagtcttag tagcagcagc accagtgcgg gttgcgccag
1801 cagccttggc ggcggcggcg cctcggagct tctccctgca acacagccca cagccagcag
1861 cgctcccaaa agccccgagc cagcccaagg cgcgcttggc tgcttataga ctgtactagg
1921 gcggagggga tccgggcctt gcgtgcagcc tcccaaccat gggctgggtt ttgtgcttac
1981 tgtatgttgg cgacttggta gggcaggaga cgcagcgtgg agcctacctc ccgacattca
2041 cgcttcgccc cacgctgctc cgactggctg cagcggacac tgcccaaagc agaggggagt
2101 ctcagtgtcc tgctagccag ccgaacactt ctctccggaa gcaggctggt tcgactgtga
2161 ggtgtttgac taaactgttt ctctgactcg ccccagaggt cgtggctcaa aggcacttag
2221 gacgccttaa atttgtaaat aaaatgttta ctacggttaa aaaaaaaaaa aaaaaaaaaa
2281 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//