LOCUS BC007293 1646 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens 4-hydroxyphenylpyruvate dioxygenase-like, mRNA (cDNA clone MGC:15668 IMAGE:3349473), complete cds. ACCESSION BC007293 VERSION BC007293.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1646) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1646) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: m Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50345871. FEATURES Location/Qualifiers source 1..1646 /db_xref="H-InvDB:HIT000033124" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15668 IMAGE:3349473" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1646 /gene="HPDL" /gene_synonym="4-HPPD-L" /gene_synonym="RP4-534D1.1" /db_xref="GeneID:84842" /db_xref="HGNC:HGNC:28242" CDS 245..1360 /gene="HPDL" /gene_synonym="4-HPPD-L" /gene_synonym="RP4-534D1.1" /codon_start=1 /product="4-hydroxyphenylpyruvate dioxygenase-like" /protein_id="AAH07293.1" /db_xref="GeneID:84842" /db_xref="HGNC:HGNC:28242" /translation="MAAPALRLCHIAFHVPAGQPLARNLQRLFGFQPLASREVDGWRQ LALRSGDAVFLVNEGAGSGEPLYGLDPRHAVPSATNLCFDVADAGAATRELAALGCSV PVPPVRVRDAQGAATYAVVSSPAGILSLTLLERAGYRGPFLPGFRPVSSAPGPGWVSR VDHLTLACTPGSSPTLLRWFHDCLGFCHLPLSPGEDPELGLEMTAGFGLGGLRLTALQ AQPGSIVPTLVLAESLPGATTRQDQVEQFLARHKGPGLQHVGLYTPNIVEATEGVATA GGQFLAPPGAYYQQPGKERQIRAAGHEPHLLARQGILLDGDKGKFLLQVFTKSLFTED TFFLELIQRQGATGFGQGNIRALWQSVQEQSARSQEA" BASE COUNT 319 a 507 c 516 g 304 t ORIGIN 1 gctcggctca ctgagacccg gtggtccaga cgctgctcct ggctggggtg gcgctgcagg 61 gagaaccgcg agctctcagg ggtcggcggg tgacttcttt ccggaagaaa gcgaggaacg 121 cgctctgcgg ggtgagccgg actccccaac tccggacgat cagcccagga ctgagagccc 181 cgaagtcccc aaccacaagt aagcggcccc agaaggacaa gtctaggtcg ccgtccagag 241 cgccatggcc gcgcccgccc ttcgtttgtg ccacatcgcc ttccacgtgc ccgccgggca 301 gcccctagcc cggaacctgc agcgcctctt cggcttccag cccctggctt cgcgggaggt 361 ggacggctgg cggcagctag ccctgcgcag cggcgacgcg gtctttttgg tgaacgaggg 421 cgcagggtct ggagagccgc tgtacggcct ggatccgcgt cacgccgtgc ccagcgccac 481 aaacctgtgc ttcgacgtgg cggacgccgg cgctgcaacc cgggagctgg cagcgctggg 541 ctgcagcgtg cctgtccctc ccgttcgcgt gcgggacgcg cagggtgccg ccacttacgc 601 cgtggtcagc tcgcctgccg gcatcctcag cctgaccttg ctggagcgcg ctggctaccg 661 cggacccttc ctacccggct tcaggcccgt gtcctctgcg cctggccccg ggtgggtcag 721 ccgcgtggac cacctgacct tggcctgcac ccccggcagc tcccccacac ttttgcgctg 781 gttccacgac tgcctgggct tttgccactt gccgctgagc ccaggtgagg atcccgagct 841 gggcctcgaa atgacagcag ggtttgggct tgggggactg aggcttacag ccctgcaggc 901 ccagccgggc agcattgtcc ccactcttgt tctggctgag tcccttccgg gggcgacgac 961 acgacaggac caggtggagc agttcctggc ccggcacaag gggccaggcc tgcagcacgt 1021 ggggctgtat acgcctaaca ttgtggaggc cactgagggg gtggcaactg ctggaggcca 1081 gttcctggct ccccctgggg catactacca gcagccagga aaggagaggc agatccgagc 1141 tgcagggcac gagcctcatc tgcttgctcg acaggggatc ctgctagatg gtgataaagg 1201 caagtttctg cttcaggtct tcaccaagtc cctttttact gaggacactt tcttcctgga 1261 gctgattcag aggcaggggg ccactggctt tggtcagggc aacatcagag ctctgtggca 1321 gtccgtacag gagcaatctg ccaggagcca ggaagcctaa ggatgcccag ggctgggtgc 1381 agccagctgt cctgcagctc tggggagacc agcacagaac tgaggaacat ctgcaggagg 1441 cccaactagt gaaaggcttt gcctccgggg ggcaggtgtg acttccattt catcagtgcc 1501 tgccagaagc tgtgtctctc attgggctcc aaagaggtgg gattttttaa aactaaaaca 1561 tttcttatat acagtctata ataaatatgt aagatacaaa gaacaataaa agaattacac 1621 actaggaaaa aaaaaaaaaa aaaaaa //