LOCUS BC007287 3344 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 213, mRNA (cDNA clone MGC:15660
IMAGE:3347511), complete cds.
ACCESSION BC007287
VERSION BC007287.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3344)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3344)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698677.
FEATURES Location/Qualifiers
source 1..3344
/db_xref="H-InvDB:HIT000033121"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15660 IMAGE:3347511"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3344
/gene="ZNF213"
/gene_synonym="CR53"
/db_xref="GeneID:7760"
/db_xref="HGNC:HGNC:13005"
/db_xref="MIM:608387"
CDS 366..1745
/gene="ZNF213"
/gene_synonym="CR53"
/codon_start=1
/product="zinc finger protein 213"
/protein_id="AAH07287.1"
/db_xref="GeneID:7760"
/db_xref="HGNC:HGNC:13005"
/db_xref="MIM:608387"
/translation="MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEAC
RQRFRQFCYGDVHGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQ
GWVREQHPGSGEEAVALVEDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGA
RRRPSVPQEQHSHSAQPPALLKEGRPGETTDTCFVSGVHGPVALGDIPFYFSREEWGT
LDPAQRDLFWDIKRENSRNTTLGFGLKGQSEKSLLQEMVPVVPGQTGSDVTVSWSPEE
AEAWESENRPRAALGPVVGARRGRPPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDLAR
HQRTHTGEKPHKCPECDKSFRSSSDLVRHQGVHTGEKPFSCSECGKSFSRSAYLADHQ
RIHTGEKPFGCSDCGKSFSLRSYLLDHRRVHTGERPFGCGECDKSFKQRAHLIAHQSL
HAKMAQPVG"
BASE COUNT 618 a 1186 c 971 g 569 t
ORIGIN
1 ggcctctggc cgcctggctc caacatcaag caccgggctc cgagtggccg ggatcagcgc
61 cccgaggcag aggccggagg gcgcgcgcac tgctaggaag tgctggtccc ccgcgccgct
121 ctgccagctt ggtcccccgg cagacgcccc tgtacgatcg ccgctcgccc cgcgggcgag
181 gctgcggtgg acagcgcggg gctccggctg gctcgccttc ccgcctgccg tgtcctgctg
241 agcgaccctg gagtacacat ccagatgcca gcccagctac cacaggggat ccctctggga
301 gactgaaagt acaggttctg gggcccaggt tgaagccgac caaccctgag cctcaggcca
361 ggggaatggc agcccccttg gaggcccagg accaggcccc tggggaggga gaagggcttc
421 tgattgtgaa agtggaagat tcctcctggg aacaggaatc tgcccagcat gaggatggca
481 gggattccga agcctgccgc cagcgcttcc ggcaattctg ctacggggat gtgcatgggc
541 ctcatgaggc cttcagccag ctctgggagc tctgctgccg ctggctgcgg cccgagctgc
601 gtaccaagga gcagatcctg gagctgctgg tgctggagca gttcctgaca gtgctgccag
661 gggagatcca gggctgggtg cgtgagcagc acccgggaag cggtgaggag gctgtcgcct
721 tggtggagga cctacagaag cagccagtga aagcctggcg acaggatgtg ccctcggagg
781 aggcggaacc cgaggctgca ggccggggat cccaggccac ggggcctccc ccgacggtgg
841 gggcacggag gcggccgtct gttccccagg agcagcacag ccatagcgcc cagcctcctg
901 ctcttcttaa agagggtcgt cccggagaga cgacggacac ctgctttgtc tctggggtcc
961 atggacctgt ggcattggga gacatcccat tctatttctc ccgggaagaa tggggcaccc
1021 tggaccctgc tcagcgggat ctcttctggg acataaagcg ggagaactcc cggaacacca
1081 ccctgggttt tgggctcaaa ggccaaagtg agaagtccct gctgcaggag atggtgccgg
1141 tggtgccagg ccagacaggc agcgacgtga ctgtgtcctg gagccccgag gaggctgagg
1201 cctgggagag cgagaaccgg ccgagggcgg ccctgggccc agtggtgggc gcgcgacggg
1261 ggcggccacc cactcgccgg cgccagttcc gggacctggc agccgagaag ccgcacagct
1321 gcgggcagtg tggaaagcgc ttccgctggg gctcggacct ggcgcggcac cagcgcacgc
1381 acacgggcga gaagccacac aagtgccctg agtgcgacaa gagcttccgc agctcctcgg
1441 acctggtgcg ccaccaaggc gtgcacacgg gcgagaagcc cttctcctgt tccgagtgcg
1501 gcaagagctt cagccgcagc gcctacctgg ccgaccacca gcgcatacac acgggcgaga
1561 agcctttcgg ctgcagcgac tgcggcaaga gcttctcgct gcgctcctac ctgctggacc
1621 atcggcgtgt gcacaccggt gagcggccct tcggctgcgg agagtgcgac aagagcttca
1681 agcagcgcgc gcacctcatc gcgcatcaga gcctgcacgc caagatggcc cagcccgtgg
1741 ggtgagcagc tgacttggcc ggaaacccgg gggaggccca gccacggcac atcctgcttt
1801 gttcaccact gggactctcc ttccatctgt ggccacctcc cgggctgtcc gagggacccc
1861 agggtacctc acactcggag ctcgcctgcc ctgcttggct ctgaggacct gcccagcgct
1921 caaagggaac ggaagccttc ccctcccgcc cccgatcttg tcctctttcc cccttctgcg
1981 cctagcgttc ctcttcccct ctagtttcct ggagccccaa cacattcctg gcagggacag
2041 cagggtggca aggactcagg tctaggtccc ttcccagaag cccccgagcc tcatttgact
2101 gtgtggctct ttggccccca ccctgtgggg tgggtccatg ggtcaggcct ctgccctacc
2161 aacctgtgcc tttcagtggg cgtggaggac tggccttggc cccccagggg gctgctggac
2221 tttgggagag acagcccaca cctgtgggac cgcgggtctt agtcacggcg gcaggggctt
2281 tctggccccc tcccactccc gtttccaggc catgaccact ctgccctgtc ctggccatac
2341 ggactcggcc tgcctttgcc ctcggcctac ttgccctagc atgaggctct gagagccacc
2401 tgcccaccaa tctggtgagg ataatggtgg ctccagcgac aggaggccaa ccctggagac
2461 caagaacagg gcgcctggct gccatctttt cctccagagg tggggctgca ccagactcag
2521 cactagcact ccatcagcac tagcacctca ctccatcagc actagcacct cactccatcg
2581 gccccggcac cctgctccat cggcactggc gccctgctcc atcggcacta atgctccact
2641 cggcgcccca ctccatcggc cccgctccat cggcactaat gccccactcg gcgccccact
2701 ccatcagcac taatgctcca ctccattggc actaacgccc caactccagc ggcactaatg
2761 ccccactcgg cgccccactc catcagcact aatgctccac tccattggca ctaacgcccc
2821 aactccagcg gcactaatga cccgctcctt tgacattggt gccccactcc atcagcacta
2881 acgccctgct ccatcggcac tggtgtccca ctccattgtc actaacgtcc ggctccatcg
2941 gcactaccac cccgctccat catcactatg tccagctccg tcggcactac caccctgctc
3001 catcatcact atgtccagct ccgtcggcac taccaccctg ctccatcatc actacgtcca
3061 gctccaacgg cactggtgcc ccattccatc ggcactaacg ccccgctcca ccggcaccag
3121 tgcctcgctc cattggcacc aacgcccagc tccaccggta ctggctcccc gctccatcgg
3181 cactaacgcc ccgcttcatt ggcactttgc tgctgcctcc tgagcactgc cttccatgaa
3241 cagggacaga ccagaggccg tgcaaggact ccccctcaga cctccaaagg gcaacagaag
3301 agtattaata aacgtgaaaa cttaaaaaaa aaaaaaaaaa aaaa
//