LOCUS BC007276 2031 bp mRNA linear HUM 04-JUN-2004
DEFINITION Homo sapiens heat shock 70kDa protein 8, mRNA (cDNA clone
IMAGE:3162067), partial cds.
ACCESSION BC007276
VERSION BC007276.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2031)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2031)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: i Column: 24.
FEATURES Location/Qualifiers
source 1..2031
/db_xref="H-InvDB:HIT000033112"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3162067"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2031
/gene="HSPA8"
/gene_synonym="HSC54"
/gene_synonym="HSC70"
/gene_synonym="HSC71"
/gene_synonym="HSP71"
/gene_synonym="HSP73"
/gene_synonym="HSPA10"
/gene_synonym="LAP1"
/gene_synonym="MGC29929"
/db_xref="GeneID:3312"
/db_xref="MIM:600816"
CDS <1..1766
/gene="HSPA8"
/gene_synonym="HSC54"
/gene_synonym="HSC70"
/gene_synonym="HSC71"
/gene_synonym="HSP71"
/gene_synonym="HSP73"
/gene_synonym="HSPA10"
/gene_synonym="LAP1"
/gene_synonym="MGC29929"
/codon_start=3
/product="HSPA8 protein"
/protein_id="AAH07276.2"
/db_xref="GeneID:3312"
/db_xref="MIM:600816"
/translation="AMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKV
QVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDA
GTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEV
KSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSS
TQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIV
LVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL
LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTK
DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGR
LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDK
QKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGF
PGGGAPPSGGASSGPTIEEVD"
BASE COUNT 622 a 424 c 473 g 512 t
ORIGIN
1 ttgcaatgaa ccccaccaac acagtttttg atgccaaacg tctgattgga cgcagatttg
61 atgatgctgt tgtccagtct gatatgaaac attggccctt tatggtggtg aatgatgctg
121 gcaggcccaa ggtccaagta gaatacaagg gagagaccaa aagcttctat ccagaggagg
181 tgtcttctat ggttctgaca aagatgaagg aaattgcaga agcctacctt gggaagactg
241 ttaccaatgc tgtggtcaca gtgccagctt actttaatga ctctcagcgt caggctacca
301 aagatgctgg aactattgct ggtctcaatg tacttagaat tattaatgag ccaactgctg
361 ctgctattgc ttacggctta gacaaaaagg ttggagcaga aagaaacgtg ctcatctttg
421 acctgggagg tggcactttt gatgtgtcaa tcctcactat tgaggatgga atctttgagg
481 tcaagtctac agctggagac acccacttgg gtggagaaga ttttgacaac cgaatggtca
541 accattttat tgctgagttt aagcgcaagc ataagaagga catcagtgag aacaagagag
601 ctgtaagacg cctccgtact gcttgtgaac gtgctaagcg taccctctct tccagcaccc
661 aggccagtat tgagatcgat tctctctatg aaggaatcga cttctatacc tccattaccc
721 gtgcccgatt tgaagaactg aatgctgacc tgttccgtgg caccctggac ccagtagaga
781 aagcccttcg agatgccaaa ctagacaagt cacagattca tgatattgtc ctggttggtg
841 gttctactcg tatccccaag attcagaagc ttctccaaga cttcttcaat ggaaaagaac
901 tgaataagag catcaaccct gatgaagctg ttgcttatgg tgcagctgtc caggcagcca
961 tcttgtctgg agacaagtct gagaatgttc aagatttgct gctcttggat gtcactcctc
1021 tttcccttgg tattgaaact gctggtggag tcatgactgt cctcatcaag cgtaatacca
1081 ccattcctac caagcagaca cagaccttca ctacctattc tgacaaccag cctggtgtgc
1141 ttattcaggt ttatgaaggc gagcgtgcca tgacaaagga taacaacctg cttggcaagt
1201 ttgaactcac aggcatacct cctgcacccc gaggtgttcc tcagattgaa gtcacttttg
1261 acattgatgc caatggtata ctcaatgtct ctgctgtgga caagagtacg ggaaaagaga
1321 acaagattac tatcactaat gacaagggcc gtttgagcaa ggaagacatt gaacgtatgg
1381 tccaggaagc tgagaagtac aaagctgaag atgagaagca gagggacaag gtgtcatcca
1441 agaattcact tgagtcctat gccttcaaca tgaaagcaac tgttgaagat gagaaacttc
1501 aaggcaagat taacgatgag gacaaacaga agattctgga caagtgtaat gaaattatca
1561 actggcttga taagaatcag actgctgaga aggaagaatt tgaacatcaa cagaaagagc
1621 tggagaaagt ttgcaacccc atcatcacca agctgtacca gagtgcagga ggcatgccag
1681 gaggaatgcc tgggggattt cctggtggtg gagctcctcc ctctggtggt gcttcctcag
1741 ggcccaccat tgaagaggtt gattaagcca accaagtgta gatgtagcat tgttccacac
1801 atttaaaaca tttgaaggac ctaaattcgt agcaaattct gtggcagttt taaaaagtta
1861 agctgctata gtaagttact gggcattctc aatacttgaa tatggaacat atgcacaggg
1921 gaaggaaata acattgcact ttataaacac tgtattgtaa gtggaaaatg caatgtctta
1981 aataaaacta tttaaaattg gccccataaa aaaaaaaaaa aaaaaaaaaa a
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