LOCUS BC007255 1780 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens placental growth factor, mRNA (cDNA clone MGC:15513
IMAGE:3028008), complete cds.
ACCESSION BC007255
VERSION BC007255.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1780)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1780)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56676307.
FEATURES Location/Qualifiers
source 1..1780
/db_xref="H-InvDB:HIT000033099"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15513 IMAGE:3028008"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1780
/gene="PGF"
/gene_synonym="D12S1900"
/gene_synonym="PLGF"
/gene_synonym="PlGF-2"
/gene_synonym="SHGC-10760"
/db_xref="GeneID:5228"
/db_xref="HGNC:HGNC:8893"
/db_xref="MIM:601121"
CDS 328..840
/gene="PGF"
/gene_synonym="D12S1900"
/gene_synonym="PLGF"
/gene_synonym="PlGF-2"
/gene_synonym="SHGC-10760"
/codon_start=1
/product="placental growth factor"
/protein_id="AAH07255.1"
/db_xref="GeneID:5228"
/db_xref="HGNC:HGNC:8893"
/db_xref="MIM:601121"
/translation="MPVMRLFPCFLQLLAGLALPAVPPQQWALSAGNGSSEVEVVPFQ
EVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANV
TMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRGKRRREKQRPTDC
HLCGDAVPRR"
BASE COUNT 378 a 544 c 543 g 315 t
ORIGIN
1 ctgcatcgac ggacggccgc ccagctacgg gaggacctgg agtggcactg ggcgcccgac
61 ggaccatccc cgggacccgc ctgcccctcg gcgccccgcc ccgccgggcc gctccccgtc
121 gggttcccca gccacagcct tacctacggg ctcctgactc cgcaaggctt ccagaagatg
181 ctcgaaccac cggccggggc ctcggggcag cagtgaggga ggcgtccagc cccccactca
241 gctcttctcc tcctgtgcca ggggctcccc gggggatgag catggtggtt ttccctcgga
301 gccccctggc tcgggacgtc tgagaagatg ccggtcatga ggctgttccc ttgcttcctg
361 cagctcctgg ccgggctggc gctgcctgct gtgccccccc agcagtgggc cttgtctgct
421 gggaacggct cgtcagaggt ggaagtggta cccttccagg aagtgtgggg ccgcagctac
481 tgccgggcgc tggagaggct ggtggacgtc gtgtccgagt accccagcga ggtggagcac
541 atgttcagcc catcctgtgt ctccctgctg cgctgcaccg gctgctgcgg cgatgagaat
601 ctgcactgtg tgccggtgga gacggccaat gtcaccatgc agctcctaaa gatccgttct
661 ggggaccggc cctcctacgt ggagctgacg ttctctcagc acgttcgctg cgaatgccgg
721 cctctgcggg agaagatgaa gccggaaagg aggagaccca agggcagggg gaagaggagg
781 agagagaagc agagacccac agactgccac ctgtgcggcg atgctgttcc ccggaggtaa
841 cccacccctt ggaggagaga gaccccgcac ccggctcgtg tatttattac cgtcacactc
901 ttcagtgact cctgctggta cctgccctct atttattagc caactgtttc cctgctgaat
961 gcctcgctcc cttcaagacg aggggcaggg aaggacagga ccctcaggaa ttcagtgcct
1021 tcaacaacgt gagagaaaga gagaagccag ccacagaccc ctgggagctt ccgctttgaa
1081 agaagcaaga cacgtggcct cgtgaggggc aagctaggcc ccagaggccc tggaggtctc
1141 caggggcctg cagaaggaaa gaagggggcc ctgctacctg ttcttgggcc tcaggctctg
1201 cacagtcaag cagcccttgc tttcggagct cctgtccaaa agtagggatg cggatcctgc
1261 tggggccgcc acggcctggc tggtgggaag gccggcagcg ggcggagggg atccagccac
1321 ttccccctct tcttctgaag atcagaacat tcagctctgg agaacagtgg ttgcctgggg
1381 gcttttgcca ctccttgtcc cccgtgatct cccctcacac tttgccattt gcttgtactg
1441 ggacattgtt ctttccggcc aaggtgccac caccctgccc cccctaagag acacatacag
1501 agtgggcccc gggctggaga aagagctgcc tggatgagaa acagctcagc cagtggggat
1561 gaggtcacca ggggaggagc ctgtgcgtcc cagctgaagg cagtggcagg ggagcaggtt
1621 ccccaagggc cctggcaccc ccacaagctg tccctgcagg gccatctgac tgccaagcca
1681 gattctcttg aataaagtat tctagtgtgg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaacctcggg
//