LOCUS BC007250 1129 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coatomer protein complex, subunit epsilon, mRNA (cDNA
clone MGC:15494 IMAGE:2989183), complete cds.
ACCESSION BC007250
VERSION BC007250.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1129)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1129)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: e Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40805824.
FEATURES Location/Qualifiers
source 1..1129
/db_xref="H-InvDB:HIT000033095"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15494 IMAGE:2989183"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1129
/gene="COPE"
/gene_synonym="epsilon-COP"
/gene_synonym="FLJ13241"
/db_xref="GeneID:11316"
/db_xref="HGNC:HGNC:2234"
/db_xref="MIM:606942"
CDS 20..946
/gene="COPE"
/gene_synonym="epsilon-COP"
/gene_synonym="FLJ13241"
/codon_start=1
/product="coatomer protein complex, subunit epsilon"
/protein_id="AAH07250.1"
/db_xref="GeneID:11316"
/db_xref="HGNC:HGNC:2234"
/db_xref="MIM:606942"
/translation="MAPPAPGPASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLS
SPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVA
ELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLD
RLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLL
LNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQ
LKDAHRSHPFIKEYQAKENDFDRLVLQYAPSA"
BASE COUNT 253 a 364 c 339 g 173 t
ORIGIN
1 ctggtgagaa gacagcgaaa tggcgcctcc ggcccccggc ccggcctccg gcggctccgg
61 ggaggtagac gagctgttcg acgtaaagaa cgccttctac atcggcagct accagcagtg
121 cataaacgag gcgcagcggg tgaagctgtc aagcccagag agagacgtgg agagggacgt
181 cttcctgtat agagcgtacc tggcgcagag gaagttcggt gtggtcctgg atgagatcaa
241 gccctcctcg gcccctgagc tccaggccgt gcgcatgttt gctgactacc tcgcccacga
301 gagtcggagg gacagcatcg tggccgagct ggaccgagag atgagcagga gcgtggacgt
361 gaccaacacc accttcctgc tcatggccgc ctccatctat ctccacgacc agaacccgga
421 tgccgccctg cgtgcgctgc accaggggga cagcctggag tgcacagcca tgacagtgca
481 gatcctgctg aagctggacc gcctggacct cgcccggaag gagctgaaga gaatgcagga
541 cctggacgag gatgccaccc tcacccagct cgccactgcc tgggtcagcc tggccacggg
601 tggtgagaag ctgcaggatg cctactacat cttccaggag atggctgaca agtgctcgcc
661 caccctgctg ctgctcaatg ggcaggcggc ctgccacatg gcccagggcc gctgggaggc
721 cgctgagggc ctgctgcagg aggcgctaga caaggatagt ggctacccgg agacgctggt
781 caacctcatc gtcctgtccc agcacctggg caagccccct gaggtgacaa accgatacct
841 gtcccagctg aaggatgccc acaggtccca tcccttcatc aaggagtacc aggccaagga
901 gaacgacttt gacaggctgg tgctacagta cgctcccagc gcctgaggct ggcccagagc
961 tgtcaggacc atgaagccag gacagaggcc aggagccagc cctgcagccc tccccacccg
1021 gcatccacct gcatcccctc tgggggcagg agcccacccc cagcaccccc atctgttaat
1081 aaatatctca actccagggt gttccacctg aaaaaaaaaa aaaaaaaaa
//