LOCUS BC007232 1255 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens family with sequence similarity 58, member A, mRNA
(cDNA clone MGC:15387 IMAGE:3347302), complete cds.
ACCESSION BC007232
VERSION BC007232.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1255)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1255)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: m Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34328080.
FEATURES Location/Qualifiers
source 1..1255
/db_xref="H-InvDB:HIT000086763"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15387 IMAGE:3347302"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1255
/gene="FAM58A"
/db_xref="GeneID:92002"
/db_xref="HGNC:HGNC:28434"
CDS 147..791
/gene="FAM58A"
/codon_start=1
/product="family with sequence similarity 58, member A"
/protein_id="AAH07232.4"
/db_xref="GeneID:92002"
/db_xref="HGNC:HGNC:28434"
/translation="MEAGVKLGMRSIPIATACTIYHKFFCETNLDAYDPYLIAMSSIY
LAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDSIVQCELLMLRVLRFQV
SFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHGALSLRFQAQHIAVA
VLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQIYTMDTEIP"
BASE COUNT 280 a 349 c 368 g 258 t
ORIGIN
1 gcgcgccggg gccgcctctc cttccgccgg tgccgcggcg cctcatggaa gccccggagg
61 gcggcggagg ggggcctgca gcgcggggcc cggaggggca gccggcgccc gaagccaggg
121 tgcacttccg agtggcgagg ttcatcatgg aggcaggtgt caagctaggg atgcggtcca
181 ttcccattgc cactgcttgc accatttacc ataagttctt ttgcgagacc aacctggacg
241 cctatgaccc ttacctgatt gccatgtctt caatttactt ggccggcaaa gtggaagagc
301 agcacctgcg gactcgtgac atcatcaatg tgtccaacag gtactttaac ccaagcggtg
361 agcccctgga attggactcc cgcttctggg aactccggga cagcatcgtg cagtgtgagc
421 ttctcatgct gagagttctg cgcttccagg tctccttcca gcatccacac aagtacctgc
481 tccactacct ggtttccctc cagaactggc tgaaccgcca cagctggcag cggacccctg
541 ttgccgtcac cgcctgggcc ctgctgcggg acagctacca tggggcgctg tccctccgct
601 tccaggccca gcacatcgcc gtggcggtgc tctacctggc cctgcaggtc tacggagttg
661 aggtgcccgc cgaggtcgag gctgagaagc cgtggtggca ggtgtttaat gacgacctta
721 ccaagccaat cattgataat attgtgtctg atctcattca gatttatacc atggacacag
781 agatccccta aggtcctggc ccaggcctgc ccaaagagaa gcccaggatg gtcggctgcc
841 tggggacatt gtcaccacgt cgccatgacg gctggtcccc acaggaccag ctgggaggac
901 tggttgtgct gctggagaag ggctggagaa ggcaatggca tgctgccgct ttgccagtcc
961 ctagaagtcg cggtgcaggt gatggtggga gccgcgcctc cagcgggcag gccgggagtg
1021 tactgtgtgc agctgaccca aggcagccac atctgcgttt gtcctttgag aggactttga
1081 ctacaataca ggcatgacat caatgaaagg aaagtcatga aatcgatgag actgaatccc
1141 tacggatttc ttaaaagcca gatttgtagg gagaatgaat gtgcaacgtg gctgaaatct
1201 attttgtgta ataaaaggtg atacaagtca aaaaaaaaaa aaaaaaaaaa aaaaa
//