LOCUS BC007213 1738 bp mRNA linear HUM 13-JUN-2005
DEFINITION Homo sapiens zinc finger, DHHC-type containing 6, mRNA (cDNA clone
MGC:14922 IMAGE:2960984), complete cds.
ACCESSION BC007213
VERSION BC007213.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1738)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1738)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: c Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11968052.
FEATURES Location/Qualifiers
source 1..1738
/db_xref="H-InvDB:HIT000033073"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14922 IMAGE:2960984"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1738
/gene="ZDHHC6"
/gene_synonym="FLJ21952"
/gene_synonym="ZNF376"
/db_xref="GeneID:64429"
CDS 412..1641
/gene="ZDHHC6"
/gene_synonym="FLJ21952"
/gene_synonym="ZNF376"
/codon_start=1
/product="ZDHHC6 protein"
/protein_id="AAH07213.1"
/db_xref="GeneID:64429"
/translation="MGTFCSVIKFENLQELKRLCHWGPIIALGVIAICSTMAMIDSVL
WYWPLHTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWKPDTMYLQYCKVCQA
YKAPRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVM
TMYTQLYHRLSFGWNTVKIDMSAARRDPLPIVPFGLAAFATTLFALGLALGTTIAVGM
LFFIQMKIILRNKTSIESWIEEKAKDRIQYYQLDEVFVFPYDMGSRWRNFKQVFTWSG
VPEGDGLEWPVREGCHQYSLTIEQLKQKADKRVRSVRYKVIEDYSGACCPLNKGIKTF
FTSPCTEEPRIQLQKGEFILATRGLRYWLYGDKILDDSFIEGVSRIRGWFPRKCVEKC
PCDAETDQAPEGEKKNR"
BASE COUNT 516 a 331 c 409 g 482 t
ORIGIN
1 gggcgctggc cgagaggtgc tcggcttgta gcaggtcccg cactccagcc tctcgctgcc
61 agggtttgct ctctgcttgt cctgggctga ggtgtccatg acggagtcat ccaaggagaa
121 aaaaatctgt tccgggtgag cccaggccgc cccggatatg cgatggctga ggagcagaca
181 ccagggacca cactgaggtt gggtttcaga ccaagacact ggattctcct agttaagata
241 aagagctttg ggtgcctgac agtgaaaatg gtgtaatctg cgttaacagt tcacagcttg
301 aaggcatgac aattaaagaa cacacatgga cttgtggcac atggaaatgt gcgcacagaa
361 aaaggaaatc tataattctt ttaaagtagg aaggcattct tccttgccaa aatgggtaca
421 ttctgttcgg ttatcaagtt tgaaaatcta caagaattaa agagactgtg tcactggggt
481 cccatcatag cccttggtgt tatagcaata tgttctacca tggccatgat tgactctgtg
541 ttgtggtatt ggcccttaca tacaactgga ggaagtgtga atttcatcat gttgataaat
601 tggactgtca tgattcttta taattacttc aatgccatgt ttgtcggtcc gggctttgtc
661 cctctggggt ggaaaccgga taccatgtat ctccagtatt gtaaagtctg ccaagcatac
721 aaggcaccac gttcacatca ctgcagaaag tgtaacagat gtgtgatgaa gatggaccat
781 cactgtcctt ggatcaacaa ctgttgtggt taccaaaatc atgcttcgtt cacactgttt
841 ctccttttag caccactggg ttgtatccat gctgctttca tttttgtgat gactatgtac
901 acacagcttt atcatcggct ctcctttggg tggaacacag tgaagatcga catgagtgca
961 gcccggagag atcctcttcc aattgttcca tttggattag ctgcatttgc taccaccttg
1021 tttgccttgg gattagcttt aggaacaacc atagctgttg ggatgttgtt ttttatccag
1081 atgaaaataa ttctcagaaa caaaacttct attgagtcat ggattgaaga gaaggctaaa
1141 gatcgaattc agtattatca actagatgaa gtctttgttt ttccatatga tatgggaagt
1201 agatggagga actttaaaca ggtatttacg tggtcagggg tccctgaagg agatggactt
1261 gagtggccag taagagaagg ctgtcaccaa tacagcttaa caatagaaca gttgaaacaa
1321 aaagcagata agagagtcag aagtgttcgc tataaagtaa tagaagatta tagtggtgcc
1381 tgctgccctc tgaataaagg aatcaaaacc ttcttcacaa gtccctgcac cgaagagcct
1441 cgaatacagc tgcaaaaagg ggaattcatt ttagccacaa gaggtttacg atactggtta
1501 tatggagaca aaattcttga tgattccttt atagaaggtg tttcaagaat aaggggttgg
1561 ttccctagaa aatgtgtgga aaagtgtccc tgtgatgctg aaacagatca agccccagag
1621 ggggagaaga aaaatagata gctgctgtta aaacaaaatt atcctttaag tctgcttaat
1681 tacttgaaaa ttgtacatat tactaaagaa ttatgcaatg aaaaaaaaaa aaaaaaaa
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