LOCUS BC007201 3316 bp mRNA linear HUM 03-NOV-2005
DEFINITION Homo sapiens obscurin-like 1, mRNA (cDNA clone IMAGE:2961284),
partial cds.
ACCESSION BC007201
VERSION BC007201.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3316)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3316)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: b Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..3316
/db_xref="H-InvDB:HIT000086753"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2961284"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3316
/gene="OBSL1"
/gene_synonym="KIAA0657"
/db_xref="GeneID:23363"
/db_xref="HGNC:HGNC:29092"
/db_xref="IMGT/GENE-DB:29092"
/db_xref="MIM:29092"
CDS <1..3137
/gene="OBSL1"
/gene_synonym="KIAA0657"
/codon_start=3
/product="OBSL1 protein"
/protein_id="AAH07201.1"
/db_xref="GeneID:23363"
/db_xref="HGNC:HGNC:29092"
/db_xref="IMGT/GENE-DB:29092"
/db_xref="MIM:29092"
/translation="LRTPPCPPTVRRCRRSAAAMKASSGDQGSPPCFLRFPRPVRVVS
GAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYV
CRARNAAGEAYAAAAVTVLEPPASDPELQPAERPLPSPGSGEGAPVFLTGPRSQWVLR
GAEVVLTCRAGGLPEPTLYWEKDGMALDEVWDSSHFALQPGRAEDGPGASLALRILAA
RLPDSGVYVCHARNAHGHAQAGALLQVHQPPESPPADPDEAPAPVVEPLKCAPKTFWV
NEGKHAKFRCYVMGKPEPEIEWHWEGRPLLPDRRRLMYRDRDGGFVLKVLYCQAKDRG
LYVCAARNSAGQTLSAVQLHVKEPRLRFTRPLQDVEGREHGIAVLECKVPNSRIPTAW
FREDQRLLPCRKYEQIEEGTVRRLIIHRLKADDDGIYLCEMRGRVRTVANVTVKGPIL
KRLPRKLDVLEGENAVLLVETLEAGVEGRWSRDGEELPVICQSSSGHMHALVLPGVTR
EDAGEVTFSLGNSRTTTLLRVKCVKHSPPGPPILAEMFKGHKNTVLLTWKPPEPAPET
PFIYRLERQEVGSEDWIQCFSIEKAGAVEVPGDCVPSEGDYRFRICTVSGHGRSPHVV
FHGSAHLVPTARLVAGLEDVQVYDGEDAVFSLDLSTIIQGTWFLNGEELKSNEPEGQV
EPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCPGVQDSAALTIQESPVHILSPQ
DKVSLTFTTSERVVLTCELSRVDFPATWYKDGQKVEESELLVVKMDGRKHRLILPEAK
VQDSGEFECRTEGVSAFFGVTVQDPPVHIVDPREHVFVHAITSECVMLACEVDREDAP
VRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDECAYFTVTITDV
SSWIVYPSGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGEEVVESPALLLQKEDTVR
RLVLPAVQLEDSGEYLCEIDDESASFTVTVTESYQSQDSSNNNPELCVLLKKPKTRRL
WSRFPPWRRTAGTE"
BASE COUNT 599 a 1056 c 1096 g 565 t
ORIGIN
1 ctctccgcac ccccccctgc ccccccaccg ttcgccgctg caggcggtcg gccgccgcga
61 tgaaggcgag ctcgggggat caggggagcc ccccgtgctt cctgcgcttc ccgcggcctg
121 tgcgggtggt aagtggcgcc gaggccgagc tcaagtgcgt ggtcctgggg gagccgccgc
181 ctgtagtggt gtgggagaag ggcgggcagc agctggcggc ctcggaacgc ctgagcttcc
241 cggcggacgg cgcggagcac ggcctgctgc tgaccgccgc actgcccacc gacgcggggg
301 tctacgtgtg ccgcgcccgc aacgcggccg gcgaggccta cgcggcggcc gccgtcaccg
361 tgctggagcc gccggcctcc gaccccgagc tgcagcccgc cgagcgcccg ctgccatcgc
421 cggggtccgg ggagggcgcc ccggtcttcc tcacggggcc tcgatcccag tgggtgctgc
481 ggggggcgga ggtggtgctg acgtgccggg cggggggcct ccccgagccc acactgtact
541 gggagaagga cgggatggcc ctggacgaag tgtgggacag cagccacttc gcgctccagc
601 cgggccgcgc cgaggacggc cccggcgcga gcctggcatt gcgcatcctg gcggctcggc
661 tgccggattc cggcgtctac gtgtgccacg cccgcaacgc gcacggccac gcgcaggcgg
721 gggcgctgct ccaggtgcac cagccccccg agagcccgcc cgcggacccc gacgaggccc
781 ccgcgccggt ggtggagccg ctcaagtgcg cgcctaagac cttctgggtg aacgagggca
841 agcacgccaa gttccgctgc tacgtgatgg gcaagcccga gcccgagatc gaatggcact
901 gggagggccg cccgctgctc ccggaccgcc gccgcctcat gtaccgcgac cgcgacggcg
961 gcttcgtgct caaggtgctc tactgccagg ccaaggatcg tgggctctac gtctgcgccg
1021 cgcgcaactc ggcgggccag acgctcagtg ccgtgcagct gcacgtgaaa gagccccgcc
1081 tccggttcac acggcccctg caggacgtgg agggccgtga gcacgggatt gccgtgctgg
1141 aatgtaaagt acccaactcc cgcatcccca cggcctggtt ccgtgaggac cagcggctgc
1201 tgccctgccg caagtacgag cagatcgaag agggcactgt ccggcgcctc atcatccaca
1261 ggctgaaggc agacgatgat ggtatctacc tgtgcgagat gcggggccgg gtgcgcaccg
1321 tggccaacgt cacagtcaaa gggcccatcc tgaagcgcct gccccggaag ctcgacgtcc
1381 tggaaggaga gaatgctgtg ctgctagtgg aaactctaga ggccggggtc gagggacgct
1441 ggagccgtga tggggaggag ctgccggtca tctgccagag cagctcaggc cacatgcatg
1501 ccctggtcct tccaggggtc acccgagagg atgctggcga ggtcaccttt agcctgggca
1561 actcccgtac cactacgctt ctcagagtaa aatgtgtcaa gcacagtccc ccaggacccc
1621 ccatattggc agagatgttc aagggccaca agaacacggt cctgttgacc tggaagcctc
1681 ccgagccagc tcccgagacc ccattcatct accggctgga gcggcaggaa gtgggctctg
1741 aagactggat tcagtgcttc agcatcgaga aagccggagc cgtggaggtg ccgggcgact
1801 gtgtgccctc cgagggtgac taccgcttcc gcatctgcac agtcagcgga catggccgta
1861 gtccccacgt ggtgttccac ggttctgctc accttgtgcc cacagctcgc ctggtggcag
1921 gtctggagga tgtgcaggta tacgacgggg aagatgccgt cttctccctc gatctctcca
1981 ccatcatcca gggtacctgg ttccttaatg gggaagagct caagagtaac gagccggagg
2041 gccaggtgga acctggggcc ctgcggtacc gtatagagca gaagggtctg cagcacagac
2101 tcatcctgca tgccgtcaag caccaggata gcggtgccct ggtcggcttc agctgccccg
2161 gcgtgcagga ctcagctgcc ctcacaatcc aagagagccc ggtgcacatc ctgagccccc
2221 aggacaaggt gtcgttgacc ttcacaacct cagagcgggt ggtgctgact tgtgagctct
2281 caagggtgga cttcccggca acctggtaca aggatgggca gaaggtggag gagagcgagt
2341 tgctggtggt gaagatggat gggcgcaaac accgtctgat cctgcctgag gccaaagtcc
2401 aggacagtgg cgagtttgag tgcaggacag aaggggtctc ggccttcttc ggcgtcactg
2461 tccaagatcc tcccgtgcac atcgtggacc cccgagaaca tgtgttcgtg catgccataa
2521 cttccgagtg tgtcatgctg gcctgtgagg tggaccgaga ggacgcccct gtgcgttggt
2581 acaaggacgg gcaggaggtg gaggagagtg acttcgtggt gctggagaat gaggggcccc
2641 atcgccgcct ggtgctgccc gccacccagc cctcagacgg gggcgagttt cagtgcgtcg
2701 ctggagatga gtgtgcctac ttcactgtca ccatcacaga cgtctcctcg tggatcgtgt
2761 atcccagcgg caaggtgtat gtggcagccg tgcgcctgga gcgtgtggtg ctgacctgtg
2821 agctatgccg gccctgggca gaggtgcgct ggaccaagga tggagaggag gtggtggaga
2881 gccccgcgct gctcctgcag aaggaagaca ctgtccgccg cctggtgctg cccgctgtcc
2941 agctcgagga ctccggcgag tacttgtgtg aaattgacga tgagtcggcc tccttcactg
3001 tcaccgtcac agagtcttac caaagtcagg acagttcaaa taacaatccg gagttatgcg
3061 tcctcttgaa aaagccgaag acccggcggc tctggtcccg cttcccccca tggcgacgaa
3121 cagctggcac tgagtagcag ctgcccccat agtttggggc ccacattcct ctgtcccacc
3181 tccctgccat tgctttttgc ctctccccag actgcttcag ccgctaacct aacctggccc
3241 ctgtgggcat ttgagtttgc gacccctgtg ttaaaccaat aaacatgcaa ataaatgtaa
3301 aaaaaaaaaa aaaaaa
//