LOCUS BC007122 1423 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens SEC22 vesicle trafficking protein homolog A (S.
cerevisiae), mRNA (cDNA clone MGC:4981 IMAGE:3459649), complete
cds.
ACCESSION BC007122
VERSION BC007122.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1423)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1423)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: e Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14591918.
FEATURES Location/Qualifiers
source 1..1423
/db_xref="H-InvDB:HIT000033060"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4981 IMAGE:3459649"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1423
/gene="SEC22A"
/db_xref="GeneID:26984"
/db_xref="HGNC:HGNC:20260"
CDS 28..951
/gene="SEC22A"
/codon_start=1
/product="SEC22 vesicle trafficking protein homolog A (S.
cerevisiae)"
/protein_id="AAH07122.1"
/db_xref="GeneID:26984"
/db_xref="HGNC:HGNC:20260"
/translation="MSMILSASVIRVRDGLPLSASTDYEQSTGMQECRKYFKMLSRKL
AQLPDRCTLKTGHYNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMK
TNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQTEIKLRPPYQISMCELGS
ANGVTSAFSVDCKGAGKISSAHQRLEPATLSGIVGFILSLLCGALNLIRGFHAIESLL
QSDGDDFNYIIAFFLGTAACLYQCYLLVYYTGWRNVKSFLTFGLICLCNMYLYELRNL
WQLFFHVTVGAFVTLQIWLRQAQGKAPDYDV"
BASE COUNT 403 a 285 c 303 g 432 t
ORIGIN
1 ctcgacaggt cttctctgtt ggttgaaatg tctatgattt tatctgcctc agtcattcgt
61 gtcagagatg gactgccact ttctgcttct actgattatg aacaaagcac aggaatgcag
121 gagtgcagaa agtattttaa aatgctttcg aggaaacttg ctcaacttcc tgatagatgt
181 acactgaaaa ctggacatta taacattaat tttattagct ctctgggagt gagctacatg
241 atgttgtgca ctgaaaatta cccaaatgtt ctcgccttct ctttcctgga tgagcttcag
301 aaggagttca ttactactta taacatgatg aagacaaata ctgctgtcag accatactgt
361 ttcattgaat ttgataactt cattcagagg accaagcagc gatataataa tcccaggtct
421 ctttcaacaa agataaatct ttctgacatg cagacggaaa tcaagctgag gcctccttat
481 caaatttcca tgtgcgaact ggggtcagcc aatggagtca catcagcatt ttctgttgac
541 tgtaaaggtg ctggtaagat ttcttctgct caccagcgac tggaaccagc aactctgtca
601 gggattgtag gatttatcct tagtctttta tgtggagctc tgaatttaat tcgaggcttt
661 catgctatag aaagtctcct gcagagtgat ggtgatgatt ttaattacat cattgcattt
721 ttccttggaa cagcagcctg cctttaccag tgttatttac ttgtctacta caccggctgg
781 cggaatgtca aatctttttt gacttttggc ttaatctgtc tatgcaacat gtatctctat
841 gaactgcgca acctctggca gcttttcttt catgtgactg tgggagcatt tgttacacta
901 cagatctggc taaggcaagc ccagggcaag gctcccgatt atgatgtctg acaccatcct
961 tcagatctat tgccttggct tcagggggat aaggagggaa catatcataa ctgcactgtg
1021 atgaagaagc tgttccccac agaggagaag ctctgctttc tttctctcca actttccttt
1081 tttaaaatca gcatgatgtg cctgtgagca tggaagagtc ctctcagaag aatgttggcc
1141 atgagactat cattcagagg aggaggggat ttctctcttc aaggccataa cagtggaaga
1201 acagtcatat gccattggaa gtcttggcca gcagtcctga atccttcctg aagagttcag
1261 aaaatagatg tggtattgct ctgaggacca ggcaggagga actctacaac ctgagtttgc
1321 ctttgtgagg cattagtata gaccaaataa aaagctgcag aaattggaaa gtttatgttt
1381 taaataaatg actgtgataa atatcaaaaa aaaaaaaaaa aaa
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