LOCUS BC007107 954 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peroxiredoxin 4, mRNA (cDNA clone MGC:14758
IMAGE:4284320), complete cds.
ACCESSION BC007107
VERSION BC007107.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 954)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 954)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453548.
FEATURES Location/Qualifiers
source 1..954
/db_xref="H-InvDB:HIT000033054"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14758 IMAGE:4284320"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..954
/gene="PRDX4"
/gene_synonym="AOE37-2"
/db_xref="GeneID:10549"
/db_xref="HGNC:HGNC:17169"
/db_xref="MIM:606506"
CDS 48..863
/gene="PRDX4"
/gene_synonym="AOE37-2"
/codon_start=1
/product="peroxiredoxin 4"
/protein_id="AAH07107.1"
/db_xref="GeneID:10549"
/db_xref="HGNC:HGNC:17169"
/db_xref="MIM:606506"
/translation="MEALPLLAATTPDHGRHRRLLLLPLLLFLLPAGAVQGWETEERP
RTREEECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELK
LTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWI
NTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLND
LPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN"
BASE COUNT 268 a 221 c 236 g 229 t
ORIGIN
1 agaagcggcg ctcgcgccaa gggacgtgtt tctgcgctcg cgtggtcatg gaggcgctgc
61 cgctgctagc cgcgacaact ccggaccacg gccgccaccg aaggctgctt ctgctgccgc
121 tactgctgtt cctgctgccg gctggagctg tgcagggctg ggagacagag gagaggcccc
181 ggactcgcga agaggagtgc cacttctacg cgggtggaca agtgtacccg ggagaggcat
241 cccgggtatc ggtcgccgac cactccctgc acctaagcaa agcgaagatt tccaagccag
301 cgccctactg ggaaggaaca gctgtgatcg atggagaatt taaggagctg aagttaactg
361 attatcgtgg gaaatacttg gttttcttct tctacccact tgatttcaca tttgtgtgtc
421 caactgaaat tatcgctttt ggcgacagac ttgaagaatt cagatctata aatactgaag
481 tggtagcatg ctctgttgat tcacagttta cccatttggc ctggattaat acccctcgaa
541 gacaaggagg acttgggcca ataaggattc cacttctttc agatttgacc catcagatct
601 caaaggacta tggtgtatac ctagaggact caggccacac tcttagaggt ctcttcatta
661 ttgatgacaa aggaatccta agacaaatta ctctgaatga tcttcctgtg ggtagatcag
721 tggatgagac actacgtttg gttcaagcat tccagtacac tgacaaacac ggagaagtct
781 gccctgctgg ctggaaacct ggtagtgaaa caataatccc agatccagct ggaaagctga
841 agtatttcga taaactgaat tgagaaatac ttcttcaagt tatgatgctt gaaagttctc
901 aataaagttc acggtttcat taccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//