LOCUS BC007063 973 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peroxiredoxin 1, mRNA (cDNA clone MGC:12514
IMAGE:3961375), complete cds.
ACCESSION BC007063
VERSION BC007063.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 973)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 973)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: c Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32455263.
FEATURES Location/Qualifiers
source 1..973
/db_xref="H-InvDB:HIT000033022"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12514 IMAGE:3961375"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..973
/gene="PRDX1"
/gene_synonym="MSP23"
/gene_synonym="NKEFA"
/gene_synonym="PAG"
/gene_synonym="PAGB"
/gene_synonym="TDPX2"
/db_xref="GeneID:5052"
/db_xref="HGNC:HGNC:9352"
/db_xref="MIM:176763"
CDS 68..667
/gene="PRDX1"
/gene_synonym="MSP23"
/gene_synonym="NKEFA"
/gene_synonym="PAG"
/gene_synonym="PAGB"
/gene_synonym="TDPX2"
/codon_start=1
/product="peroxiredoxin 1"
/protein_id="AAH07063.1"
/db_xref="GeneID:5052"
/db_xref="HGNC:HGNC:9352"
/db_xref="MIM:176763"
/translation="MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFY
PLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNI
PLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLV
QAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEYFSKQK"
BASE COUNT 258 a 200 c 238 g 277 t
ORIGIN
1 gcgtcttgtt cttgcctggt gtcggtggtt agtttctgcg acttgtgttg ggactgctga
61 taggaagatg tcttcaggaa atgctaaaat tgggcaccct gcccccaact tcaaagccac
121 agctgttatg ccagatggtc agtttaaaga tatcagcctg tctgactaca aaggaaaata
181 tgttgtgttc ttcttttacc ctcttgactt cacctttgtg tgccccacgg agatcattgc
241 tttcagtgat agggcagaag aatttaagaa actcaactgc caagtgattg gtgcttctgt
301 ggattctcac ttctgtcatc tagcatgggt caatacacct aagaaacaag gaggactggg
361 acccatgaac attcctttgg tatcagaccc gaagcgcacc attgctcagg attatggggt
421 cttaaaggct gatgaaggca tctcgttcag gggccttttt atcattgatg ataagggtat
481 tcttcggcag atcactgtaa atgacctccc tgttggccgc tctgtggatg agactttgag
541 actagttcag gccttccagt tcactgacaa acatggggaa gtgtgcccag ctggctggaa
601 acctggcagt gataccatca agcctgatgt ccaaaagagc aaagaatatt tctccaagca
661 gaagtgagcg ctgggctgtt ttagtgccag gctgcggtgg gcagccatga gaacaaaacc
721 tcttctgtat tttttttttc cattagtaaa acacaagact tcagattcag ccgaattgtg
781 gtgtcttaca aggcaggcct ttcctacagg gggtggagag accagccttt cttcctttgg
841 taggaatggc ctgagttggc gttgtgggca ggctactggt ttgtatgatg tattagtaga
901 gcaacccatt aatcttttgt agtttgtatt aaacttgaac tgagcaaaaa aaaaaaaaaa
961 aaaaaaaaaa aaa
//