LOCUS BC007052 1399 bp mRNA linear HUM 07-NOV-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2),
mRNA (cDNA clone MGC:12469 IMAGE:3686841), complete cds.
ACCESSION BC007052
VERSION BC007052.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1399)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1399)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14110430.
FEATURES Location/Qualifiers
source 1..1399
/db_xref="H-InvDB:HIT000033013"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12469 IMAGE:3686841"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1399
/gene="HNRPC"
/gene_synonym="C1"
/gene_synonym="C2"
/gene_synonym="HNRNP"
/gene_synonym="hnRNPC"
/gene_synonym="SNRPC"
/db_xref="GeneID:3183"
/db_xref="HGNC:HGNC:5035"
/db_xref="MIM:164020"
CDS 165..1085
/gene="HNRPC"
/gene_synonym="C1"
/gene_synonym="C2"
/gene_synonym="HNRNP"
/gene_synonym="hnRNPC"
/gene_synonym="SNRPC"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein C
(C1/C2)"
/protein_id="AAH07052.1"
/db_xref="GeneID:3183"
/db_xref="HGNC:HGNC:5035"
/db_xref="MIM:164020"
/translation="MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIV
GCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAA
EMYGSVTEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQR
VSGNTSRRGKSGFNSKSGQRGSSKSGKLKGDDLQAIKKELTQIKQKVDSLLENLEKIE
KEQSKQAVEMKNDKSEEEQSSSSVKKDETNVKMESGGGADDSAEEGDLLDDDDNEDRG
DDQLELIKDDEKEAEEGEDDRDSANGEDDS"
BASE COUNT 405 a 300 c 341 g 353 t
ORIGIN
1 cattttgtga agagacgaag actgagcggt tgtggccgcg ttgccgacct ccagcagcag
61 tcggcttctc tacgcagaac ccgggagtag gagactcaga atcgaatctc ttctccctcc
121 ccttcttgtt ttcggctttg tgagaaacct taccatcaaa cacgatggcc agcaacgtta
181 ccaacaagac agatcctcgc tccatgaact cccgtgtatt cattgggaat ctcaacactc
241 ttgtggtcaa gaaatctgat gtggaggcaa tcttttcgaa gtatggcaaa attgtgggct
301 gctctgttca taagggcttt gccttcgttc agtatgttaa tgagagaaat gcccgggctg
361 ctgtagcagg agaggatggc agaatgattg ctggccaggt tttagatatt aacctggctg
421 cagagccaaa agtgaaccga ggaaaagcag gtgtgaaacg atctgcagcg gagatgtacg
481 ggtcagtaac agaacaccct tctccgtccc ctctactcag ctcctctttt gacttggact
541 atgactttca acgggactat tatgatagga tgtacagtta cccagcacgt gtacctcctc
601 ctcctcctat tgctcgggct gtagtgccct cgaaacgtca gcgtgtatca ggaaacactt
661 cacgaagggg caaaagtggc ttcaattcta agagtggaca gcggggatct tccaagtctg
721 gaaagttgaa aggagatgac cttcaggcca ttaagaagga gctgacccag ataaaacaaa
781 aagtggattc tctcctggaa aacctggaaa aaattgaaaa ggaacagagc aaacaagcag
841 tagagatgaa gaatgataag tcagaagagg agcagagcag cagctccgtg aagaaagatg
901 agactaatgt gaagatggag tctggggggg gtgcagatga ctctgctgag gagggggacc
961 tactggatga tgatgataat gaagatcggg gggatgacca gctggagttg atcaaggatg
1021 atgaaaaaga ggctgaggaa ggagaggatg acagagacag cgccaatggc gaggatgact
1081 cttaagcaca tagtggggtt tagaaatctt atcccattat ttctttacct aggcgcttgt
1141 ctaagatcaa atttttcacc agatcctctc ccctagtatc ttcagcacat gctcactgtt
1201 ctccccatcc ttgtccttcc catgttcatt aattcatatt gccccgcgcc tagtcccatt
1261 ttcacttcct ttgacgctcc tagtagtttt gttaagtctt accctgtaat ttttgctttt
1321 aattttgata cctctttatg acttaacaat aaaaaggatg tatggtttct aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaa
//