LOCUS BC007048 1121 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens zinc finger, MYM-type 5, mRNA (cDNA clone MGC:12459
IMAGE:3681047), complete cds.
ACCESSION BC007048
VERSION BC007048.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1121)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1121)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: g Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7657706.
FEATURES Location/Qualifiers
source 1..1121
/db_xref="H-InvDB:HIT000033009"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12459 IMAGE:3681047"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1121
/gene="ZMYM5"
/gene_synonym="HSPC050"
/gene_synonym="MYM"
/gene_synonym="ZNF198L1"
/db_xref="GeneID:9205"
/db_xref="HGNC:HGNC:13029"
CDS 138..764
/gene="ZMYM5"
/gene_synonym="HSPC050"
/gene_synonym="MYM"
/gene_synonym="ZNF198L1"
/codon_start=1
/product="zinc finger, MYM-type 5"
/protein_id="AAH07048.1"
/db_xref="GeneID:9205"
/db_xref="HGNC:HGNC:13029"
/translation="MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVS
RSRNSPVEDDDDDDDVVFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPS
SRDLASQKGNISETIVIDDEEDVETNGGAEKKSSFFIEWGLPGTKNKTNDLDFSTSSL
SRSKTKTGVRPFNPGRMNVAGDLFQNGEFATHHSPEMHLQRRLMSFFQ"
BASE COUNT 383 a 178 c 240 g 320 t
ORIGIN
1 gctgagagtg ggggtggctg ggagcagcgc agcctccgga ggaggaggcg gaggccgagg
61 accaggaatc accttcaagc ctatgtcgtg aggctttggc agaaattaag aaggaaatat
121 ctccattatt cattggcatg gaaaaatgtt cagtgggagg attagagttg actgaacaga
181 ctcctgcttt attagggaat atggccatgg caactagtct catggacata ggggattcat
241 ttggtcatcc agcttgtcct ttagtcagta gatctaggaa ctcaccagtg gaagatgatg
301 atgatgatga tgatgttgtg tttattgaat ctatacaacc tccttcaatt tctgctccag
361 caatagctga tcaaagaaac ttcatatttg catcatcaaa aaatgaaaag cctcaaggaa
421 attattctgt aattcctcct tcttcaagag atttggcatc tcagaaggga aatataagtg
481 agacaattgt tattgatgat gaagaggacg tagaaacaaa tggaggagca gagaaaaagt
541 cttccttttt tatcgaatgg ggacttcctg gaactaaaaa caaaaccaac gatttggatt
601 tctccacttc cagtctttca agaagtaaga ccaagactgg agtaagacct tttaaccctg
661 gtagaatgaa tgtggcagga gacttatttc agaatggaga atttgcaact catcatagtc
721 ctgagatgca tctacaaaga aggctaatgt cattcttcca gtagaatcaa gcaaatcctt
781 ccaagaattt tatagtacat cttgtttgtc tccctgtgaa aacaactgga atcttaaaaa
841 aggagttttt aataagtcaa gatgtacaat ttgtagtaaa ttagcagagg tctggatttt
901 tatacctaag ttgttgttta ggctaacagt gataatttta acttttaagt gctattatgt
961 actctttcat ctacataatg cacatgttct ggatgtataa catgaagctg aaaggaagaa
1021 taaggatatg ttagaactat cttatgggat attttataaa taaaattcca tttgcatagc
1081 atggaaagta caaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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