LOCUS BC007039 930 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens amyloid P component, serum, mRNA (cDNA clone MGC:12419 IMAGE:3935086), complete cds. ACCESSION BC007039 VERSION BC007039.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 930) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 930) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 16 Row: h Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18375514. FEATURES Location/Qualifiers source 1..930 /db_xref="H-InvDB:HIT000033003" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12419 IMAGE:3935086" /tissue_type="Skeletal Muscle" /clone_lib="NIH_MGC_81" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..930 /gene="APCS" /gene_synonym="PTX2" /gene_synonym="SAP" /db_xref="GeneID:325" /db_xref="HGNC:HGNC:584" /db_xref="MIM:104770" CDS 97..768 /gene="APCS" /gene_synonym="PTX2" /gene_synonym="SAP" /codon_start=1 /product="amyloid P component, serum" /protein_id="AAH07039.1" /db_xref="GeneID:325" /db_xref="HGNC:HGNC:584" /db_xref="MIM:104770" /translation="MNKPLLWISVLTSLLEAFAHTDLSGKVFVFPRESVTDHVNLITP LEKPLQNFTLCFRAYSDLSRAYSLFSYNTQGRDNELLVYKERVGEYSLYIGRHKVTSK VIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKGLRQGYFVEAQPKIVLGQEQDSYG GKFDRSQSFVGEIGDLYMWDSVLPPENILSAYQGTPLPANILDWQALNYEIRGYVIIK PLVWV" BASE COUNT 256 a 207 c 216 g 251 t ORIGIN 1 gggcatgaat atcagacgct agggggacag ccactgtgtt gtctgctacc ctcatcctgg 61 tcactgcttc tgctataaca gccctaggcc aggaatatga acaagccgct gctttggatc 121 tctgtcctca ccagcctcct ggaagccttt gctcacacag acctcagtgg gaaggtgttt 181 gtatttccta gagaatctgt tactgatcat gtaaacttga tcacaccgct ggagaagcct 241 ctacagaact ttaccttgtg ttttcgagcc tatagtgatc tctctcgtgc ctacagcctc 301 ttctcctaca atacccaagg cagggataat gagctactag tttataaaga aagagttgga 361 gagtatagtc tatacattgg aagacacaaa gttacatcca aagttatcga aaagttcccg 421 gctccagtgc acatctgtgt gagctgggag tcctcatcag gtattgctga attttggatc 481 aatgggacac ctttggtgaa aaagggtctg cgacagggtt actttgtgga agctcagccc 541 aagattgtcc tggggcagga acaggattcc tatgggggca agtttgatag gagccagtcc 601 tttgtgggag agattgggga tttgtacatg tgggactctg tgctgccccc agaaaatatc 661 ctgtctgcct atcagggtac ccctctccct gccaatatcc tggactggca ggctctgaac 721 tatgaaatca gaggatatgt catcatcaaa cccttggtgt gggtctgagg tcttgactca 781 acgagagcac ttgaaaatga aatgactgtc taagagatct ggtcaaagca actggatact 841 agatcttaca tctgcagctc tttcttcttt gaatttccta tctgtatgtc tgcctaatta 901 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //