LOCUS BC007026 624 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens serum amyloid A4, constitutive, mRNA (cDNA clone
MGC:12381 IMAGE:4071711), complete cds.
ACCESSION BC007026
VERSION BC007026.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 624)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 624)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: b Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10835094.
FEATURES Location/Qualifiers
source 1..624
/db_xref="H-InvDB:HIT000032995"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12381 IMAGE:4071711"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..624
/gene="SAA4"
/gene_synonym="C-SAA"
/gene_synonym="CSAA"
/db_xref="GeneID:6291"
/db_xref="HGNC:HGNC:10516"
/db_xref="MIM:104752"
CDS 58..450
/gene="SAA4"
/gene_synonym="C-SAA"
/gene_synonym="CSAA"
/codon_start=1
/product="serum amyloid A4, constitutive"
/protein_id="AAH07026.1"
/db_xref="GeneID:6291"
/db_xref="HGNC:HGNC:10516"
/db_xref="MIM:104752"
/translation="MRLFTGIVFCSLVMGVTSESWRSFFKEALQGVGDMGRAYWDIMI
SNHQNSNRYLYARGNYDAAQRGPGGVWAAKLISRSRVYLQGLIDYYLFGNSSTVLEDS
KSNEKAEEWGRSGKDPDRFRPDGLPKKY"
BASE COUNT 185 a 142 c 156 g 141 t
ORIGIN
1 agataccagc agctctgcct ttactgaaat ttcagctgga gaaaggtcca cagcacaatg
61 aggcttttca caggcattgt tttctgctcc ttggtcatgg gagtcaccag tgaaagctgg
121 cgttcgtttt tcaaggaggc tctccaaggg gttggggaca tgggcagagc ctattgggac
181 ataatgatat ccaatcacca aaattcaaac agatatctct atgctcgggg aaactatgat
241 gctgcccaaa gaggacctgg gggtgtctgg gctgctaaac tcatcagccg ttccagggtc
301 tatcttcagg gattaataga ctactattta tttggaaaca gcagcactgt attggaggac
361 tcgaagtcca acgagaaagc tgaggaatgg ggccggagtg gcaaagaccc cgaccgcttc
421 agacctgacg gcctgcctaa gaaatactga gcttcctgct cctctgctct cagggaaact
481 gggctgtgag ccacacactt ctccccccag acagggacac agggtcactg agctttgtgt
541 ccccaggaac tggtataggg cacctagagg tgttcaataa atgtttgtca aaataaaaaa
601 aaaaaaaaaa aaaaaaaaaa aaaa
//