LOCUS BC006997 2826 bp mRNA linear HUM 07-NOV-2006
DEFINITION Homo sapiens GTPase activating protein (SH3 domain) binding protein
1, mRNA (cDNA clone MGC:12272 IMAGE:3950738), complete cds.
ACCESSION BC006997
VERSION BC006997.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2826)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2826)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: m Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327550.
FEATURES Location/Qualifiers
source 1..2826
/db_xref="H-InvDB:HIT000032975"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12272 IMAGE:3950738"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2826
/gene="G3BP1"
/gene_synonym="G3BP"
/gene_synonym="HDH-VIII"
/db_xref="GeneID:10146"
/db_xref="HGNC:HGNC:30292"
/db_xref="MIM:608431"
CDS 135..1535
/gene="G3BP1"
/gene_synonym="G3BP"
/gene_synonym="HDH-VIII"
/codon_start=1
/product="GTPase activating protein (SH3 domain) binding
protein 1"
/protein_id="AAH06997.1"
/db_xref="GeneID:10146"
/db_xref="HGNC:HGNC:30292"
/db_xref="MIM:608431"
/translation="MVMEKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGG
LDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNN
QALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEERQ
QTPEVVPDDSGTFYDQAVVSNDMEEHLEEPVAEPEPDPEPEPEQEPVSEIQEEKPEPV
LEETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGAVPVTGIPPHVVK
VPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEQGDIEPRRMV
RHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEPVQ
KVLSNRPIMFRGEVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGLGGGMRGPPRGGM
VQKPGFGVGRGLAPRQ"
BASE COUNT 817 a 535 c 624 g 850 t
ORIGIN
1 gtgtgcggac gcagttgcgt gaggggtttg tgctatcctc ggtgctgtgg tgcagagcta
61 gttcctctcc agctcagccg cgtaggtttg gacatatttg actcttttcc ccccaggttg
121 aattgaccaa agcaatggtg atggagaagc ctagtcccct gctggtcggg cgggaatttg
181 tgagacagta ttacacactg ctgaaccagg ccccagacat gctgcataga ttttatggaa
241 agaactcttc ttatgtccat gggggattgg attcaaatgg aaagccagca gatgcagtct
301 acggacagaa agaaatccac aggaaagtga tgtcacaaaa cttcaccaac tgccacacca
361 agattcgcca tgttgatgct catgccacgc taaatgatgg tgtggtagtc caggtgatgg
421 ggcttctctc taacaacaac caggctttga ggagattcat gcaaacgttt gtccttgctc
481 ctgaggggtc tgttgcaaat aaattctatg ttcacaatga tatcttcaga taccaagatg
541 aggtctttgg tgggtttgtc actgagcctc aggaggagtc tgaagaagaa gtagaggaac
601 ctgaagaaag acagcaaaca cctgaggtgg tacctgatga ttctggaact ttctatgatc
661 aggcagttgt cagtaatgac atggaagaac atttagagga gcctgttgct gaaccagagc
721 ctgatcctga accagaacca gaacaagaac ctgtatctga aatccaagag gaaaagcctg
781 agccagtatt agaagaaact gcccctgagg atgctcagaa gagttcttct ccagcacctg
841 cagacatagc tcagacagta caggaagact tgaggacatt ttcttgggca tctgtgacca
901 gtaagaatct tccacccagt ggagctgttc cagttactgg gataccacct catgttgtta
961 aagtaccagc ttcacagccc cgtccagagt ctaagcctga atctcagatt ccaccacaaa
1021 gacctcagcg ggatcaaaga gtgcgagaac aacgaataaa tattcctccc caaaggggac
1081 ccagaccaat ccgtgaggct ggtgagcaag gtgacattga accccgaaga atggtgagac
1141 accctgacag tcaccaactc ttcattggca acctgcctca tgaagtggac aaatcagagc
1201 ttaaagattt ctttcaaagt tatggaaacg tggtggagtt gcgcattaac agtggtggga
1261 aattacccaa ttttggtttt gttgtgtttg atgattctga gcctgttcag aaagtcctta
1321 gcaacaggcc catcatgttc agaggtgagg tccgtctgaa tgtcgaagag aagaagactc
1381 gagctgccag ggaaggcgac cgacgagata atcgccttcg gggacctgga ggccctcgag
1441 gtgggctggg tggtggaatg agaggccctc cccgtggagg catggtgcag aaaccaggat
1501 ttggagtggg aagggggctt gcgccacggc agtgaatctt catggatctt catgcagcca
1561 tacaaaccct ggttccaaca gaatggtgaa ttttcgacag cctttggtat cttggagtat
1621 gaccccagtc tgttataaac tgcttaagtt tgtataattt tacttttttt gtgtgttaat
1681 ggtgtgtgct ccctctccct ctcttccctt tcctgacctt tagtctttca cttccaattt
1741 tgtggaatga tattttagga ataacggact tttaaagaag caaaaaaaaa agactgaatt
1801 tccttgctta ctttgcatat acagactgga tttttttttt ttttttacag ccatttcccc
1861 aaaggaatgt cttgcatatt actgacattt ggtatgtttc attcattgga atatttctta
1921 ttttctacgt gtttgaaaag cctgtaagaa atacaggatt tgataatatt ttgaaggcag
1981 gaaaaaccca aattgtttct tctttgagag tcatgactac cttctggtgt ggagaaattg
2041 ccattggaaa atttgacaat tttgattctc actggtatgt ttaaaaactg aataaaagga
2101 atagaatttt tttttgataa aggatcacaa aacaattcta aaacctaact gtttttacca
2161 ttgaaattta aattgtgata ataggtttta aatgtctaga atgcaactga taggcttttc
2221 ttgaactgtt agtttttttg aagtagtttt ttcatgttta atttgtattt gtaaaaaaac
2281 aaaaagcaaa aaaattccca aaacccagat aacaaccaga gcaaaactgt tgtgccttct
2341 atttatcttt gatttcagtc ttggcaattg tttaaaaaaa aaatctagat ttgttttatt
2401 aggttcagag tatgtgggga attatagaat ccctctttca tcactttgtg tatgtctttt
2461 gttaacatat ttgttatgcc ttattctaaa attgagtctc aaactggaat gcctttgaag
2521 acagatgctt ctatagaggt tctttgacct aaatagttca gcatttgtat ttttattctg
2581 gtatctaatc agattcctaa tcatagcccg taagaaggaa tgttacttta atattggact
2641 ttgctcatgt gctcgtgtcc gcattttttt ttttcttaaa atcatagcca tatggtaaat
2701 tttctatttt gttatggttc tcttttattg atgggcatgc agtgggtgtt acttggaaat
2761 ggccaatttt tattaaaata tttctggaag aaaatccaaa aaaaaaaaaa aaaaaaaaaa
2821 aaaaaa
//