LOCUS BC006980 1147 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cysteine-rich PDZ-binding protein, mRNA (cDNA clone
MGC:12189 IMAGE:3826521), complete cds.
ACCESSION BC006980
VERSION BC006980.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1147)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1147)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: g Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41350204.
FEATURES Location/Qualifiers
source 1..1147
/db_xref="H-InvDB:HIT000032963"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12189 IMAGE:3826521"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1147
/gene="CRIPT"
/gene_synonym="HSPC139"
/db_xref="GeneID:9419"
/db_xref="HGNC:HGNC:14312"
/db_xref="MIM:604594"
CDS 69..374
/gene="CRIPT"
/gene_synonym="HSPC139"
/codon_start=1
/product="cysteine-rich PDZ-binding protein"
/protein_id="AAH06980.1"
/db_xref="GeneID:9419"
/db_xref="HGNC:HGNC:14312"
/db_xref="MIM:604594"
/translation="MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKK
ARFDPYGKNKFSTCRICKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV"
BASE COUNT 387 a 189 c 208 g 363 t
ORIGIN
1 gtagtgttgt tgttttcagc ctgctgctgc tgctgctgtt gcggctaggg gaaccgtcgt
61 ggggaaggat ggtgtgcgaa aaatgtgaaa agaaacttgg tactgttatc actccagata
121 catggaaaga tggtgctagg aataccacag aaagtggtgg aagaaagctg aatgaaaata
181 aagctttgac ttcaaaaaaa gcaagatttg atccatatgg aaagaataag ttctccactt
241 gtagaatttg taaaagttct gtgcaccaac caggttctca ttactgccag ggctgtgcct
301 acaaaaaagg catctgtgcg atgtgtggaa aaaaggtttt ggataccaaa aactacaagc
361 aaacatctgt ctagatgtat tgatggaatt tctggctttc taaatgattt tactttctgc
421 cttgaatttt caaggcatag atgtcaactt acagaataac atgttttaag ataattaagt
481 ttaaaccaga gaatttgatt gttactcatt ttgctctcat gttctaaaca gcaacagtgt
541 aactagtctt ttgttgtaaa tggttatttt ccttataaga attttaagaa ctaagtggca
601 aattccatga aaatatttct cagttctgta tgcactttta tttaacatta ttcatataat
661 tctcccccca ccactttatt tatagatact gcaaaagtga gaaggagata atagatactt
721 tgctctgaat ttggcatcca gagttaacat ttctcccctc actcccttgc tggtgtcata
781 gttattagaa tcagcagcct cttaactaat tgcggtttca taggatatat aaatgtttca
841 agccattatt gctgaatggt tctttagtta ttaacctaga cccaaatcaa agaccagttg
901 gatttatgat attttttatt tgttcttgta gccaaagtgc cagtttcttt aatatgtgac
961 caagaacaca aggagcatcc atatggccaa ataaatacac tgaattttag aaaaacatat
1021 tactttgaat tcaaattgtc atgaaaacca gaacagtgtt tgtccatgtt gcatgtaatg
1081 aaaataaatc cctgctctga gaaaaactct ttgaaccaaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaa
//