LOCUS BC006821 803 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chromobox homolog 5 (HP1 alpha homolog, Drosophila), mRNA (cDNA clone MGC:4985 IMAGE:3448801), complete cds. ACCESSION BC006821 VERSION BC006821.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 803) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 803) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: f Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6912291. FEATURES Location/Qualifiers source 1..803 /db_xref="H-InvDB:HIT000032949" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4985 IMAGE:3448801" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..803 /gene="CBX5" /gene_synonym="HP1" /gene_synonym="HP1-ALPHA" /gene_synonym="HP1Hs-alpha" /db_xref="GeneID:23468" /db_xref="HGNC:HGNC:1555" /db_xref="MIM:604478" CDS 69..644 /gene="CBX5" /gene_synonym="HP1" /gene_synonym="HP1-ALPHA" /gene_synonym="HP1Hs-alpha" /codon_start=1 /product="chromobox homolog 5 (HP1 alpha homolog, Drosophila)" /protein_id="AAH06821.1" /db_xref="GeneID:23468" /db_xref="HGNC:HGNC:1555" /db_xref="MIM:604478" /translation="MGKKTKRTADSSSSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGF SEEHNTWEPEKNLDCPELISEFMKKYKKMKEGENNKPREKSESNKRKSNFSNSADDIK SKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKC PQIVIAFYEERLTWHAYPEDAENKEKETAKS" BASE COUNT 292 a 138 c 198 g 175 t ORIGIN 1 gggaaagaaa gaactggggc gatccgggac ctggtggcct tagtctttca ggtggaacgg 61 tgtgcgacat gggaaagaaa accaagcgga cagctgacag ttcttcttca gaggatgagg 121 aggagtatgt tgtggagaag gtgctagaca ggcgcgtggt taagggacaa gtggaatatc 181 tactgaagtg gaaaggcttt tctgaggagc acaatacttg ggaacctgag aaaaacttgg 241 attgccctga gctaatttct gaatttatga aaaagtataa gaagatgaag gagggtgaaa 301 ataataaacc cagggagaag tcagaaagta acaagaggaa atccaatttc tcaaacagtg 361 ccgatgacat caaatctaaa aaaaagagag agcagagcaa tgatatcgct cggggctttg 421 agagaggact ggaaccagaa aagatcattg gggcaacaga ttcctgtggt gatttaatgt 481 tcctaatgaa atggaaagac acagatgaag ctgacctggt tcttgcaaaa gaagctaatg 541 tgaaatgtcc acaaattgtg atagcatttt atgaagagag actgacatgg catgcatatc 601 ctgaggatgc ggaaaacaaa gagaaagaaa cagcaaagag ctaaaggagg ggatggtctc 661 tgtcatttct ctttgtacat aatacattca cctccctgcc tcctctcctt tctacccacc 721 cctttctatc ctaaacacat ccataaaaaa tgtgcttatc actgtgctcc acaaaaaaaa 781 aaaaaaaaaa aaaaaaaaaa aaa //