LOCUS BC006772 540 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribosomal protein S13, mRNA (cDNA clone MGC:5071
IMAGE:2899987), complete cds.
ACCESSION BC006772
VERSION BC006772.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 540)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 540)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: g Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14591910.
FEATURES Location/Qualifiers
source 1..540
/db_xref="H-InvDB:HIT000032935"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5071 IMAGE:2899987"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..540
/gene="RPS13"
/db_xref="GeneID:6207"
/db_xref="HGNC:HGNC:10386"
/db_xref="MIM:180476"
CDS 14..469
/gene="RPS13"
/codon_start=1
/product="ribosomal protein S13"
/protein_id="AAH06772.1"
/db_xref="GeneID:6207"
/db_xref="HGNC:HGNC:10386"
/db_xref="MIM:180476"
/translation="MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKG
LTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHL
ERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA"
BASE COUNT 172 a 116 c 114 g 138 t
ORIGIN
1 gatcgccgcc atcatgggtc gcatgcatgc tcccgggaag ggcctgtccc agtcggcttt
61 accctatcga cgcagcgtcc ccacttggtt gaagttgaca tctgacgacg tgaaggagca
121 gatttacaaa ctggccaaga agggccttac tccttcacag atcggtgtaa tcctgagaga
181 ttcacatggt gttgcacaag tacgttttgt gacaggcaat aaaattttaa gaattcttaa
241 gtctaaggga cttgctcctg atcttcctga agatctctac catttaatta agaaagcagt
301 tgctgttcga aagcatcttg agaggaacag aaaggataag gatgctaaat tccgtctgat
361 tctaatagag agccggattc accgtttggc tcgatattat aagaccaagc gagtcctccc
421 tcccaattgg aaatatgaat catctacagc ctctgccctg gtcgcataaa tttgtctgtg
481 tactcaagca ataaaatgat tgtttaacta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//