LOCUS BC006392 2644 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens 2',3'-cyclic nucleotide 3' phosphodiesterase, mRNA
(cDNA clone MGC:12818 IMAGE:4126696), complete cds.
ACCESSION BC006392
VERSION BC006392.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2644)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2644)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC006392.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: h Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38570090.
FEATURES Location/Qualifiers
source 1..2644
/db_xref="H-InvDB:HIT000032803"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12818 IMAGE:4126696"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2644
/gene="CNP"
/gene_synonym="CNP1"
/db_xref="GeneID:1267"
/db_xref="HGNC:HGNC:2158"
/db_xref="MIM:123830"
CDS 104..1369
/gene="CNP"
/gene_synonym="CNP1"
/codon_start=1
/product="2',3'-cyclic nucleotide 3' phosphodiesterase"
/protein_id="AAH06392.1"
/db_xref="GeneID:1267"
/db_xref="HGNC:HGNC:2158"
/db_xref="MIM:123830"
/translation="MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVA
TLLECKTLFILRGLPGSGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKR
LDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQ
LKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKA
FKKELRQFVPGDEPREKMDLVTYFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKK
SYSKAFTLTISALFVTPKTTGARVELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLG
CAADVEAVQTGLDLLEILRQEKGGSRGEEVGELSRGKLYSLGNGRWMLTLAKNMEVRA
IFTGYYGKGKPVPTQGSRKGGALQSCTII"
BASE COUNT 591 a 746 c 760 g 547 t
ORIGIN
1 ctcgggttgt gccaccgctg gactcccgtg tccctccgcg caggcgggcg gccccggagc
61 gctggtgccg gcagaggcgg cgacggtggc gcccctcctc atcatgaaca gaggcttctc
121 ccgaaaaagc cacacattcc tgcccaagat cttcttccgc aagatgtcat cctcaggggc
181 caaggacaag cctgagctgc agtttccctt ccttcaggat gaggacacag tggccacgct
241 gctagagtgc aagacgctct tcatcttgcg cggcctgcca ggaagcggca agtccacgct
301 ggcacgggtc atcgtggaca agtaccgtga tggcaccaag atggtgtcgg ctgacgctta
361 caagatcacc cccggcgctc gaggagcctt ctccgaggag tacaagcggc tcgatgagga
421 cctggctgcc tactgccgcc gccgggacat cagaattctt gtgcttgatg acaccaacca
481 cgaacgggaa cggctggagc agctctttga aatggccgac cagtaccagt accaggtggt
541 gctggtggag cccaagacgg cgtggcggct ggactgtgcc cagctcaagg agaagaacca
601 gtggcagctg tcggctgatg acctgaagaa gctgaagcct gggctggaga aggacttcct
661 gccgctctac ttcggctggt tcctgaccaa gaagagctct gagaccctcc gcaaagccgg
721 ccaggtcttc ctggaagagc tggggaacca caaggccttc aagaaggagc tgcgacaatt
781 cgtccctggg gatgagccca gggagaagat ggacttggtc acctactttg gaaagagacc
841 cccaggcgtg ctgcattgca caaccaagtt ttgtgactac gggaaggctc ccggggcaga
901 ggagtacgct caacaagatg tgttaaagaa atcttactcc aaggccttca cgctgaccat
961 ctctgccctc tttgtgacac ccaagacgac tggggcccgg gtggagttaa gcgagcagca
1021 actgcagttg tggccgagtg atgtggacaa gctgtcaccc actgacaacc tgccgcgggg
1081 gagccgcgcc cacatcaccc tcggctgtgc agctgacgta gaggccgtgc agacgggcct
1141 tgacctctta gagattctgc ggcaggagaa ggggggcagc cgaggcgagg aggtgggcga
1201 gctaagccgg ggcaagctct attccttggg caatgggcgc tggatgctga ccctggccaa
1261 gaacatggag gtcagggcca tcttcacggg atactacggg aaaggcaaac ctgtgcccac
1321 gcaaggtagc cggaaggggg gcgccttgca gtcctgcacc atcatatgag tgttctcacc
1381 accacttatg cccctagaag ggaaggggag agggaaacgt gccctctgtt tgatccttgt
1441 tttgtgacat tttttttttt ttttttttta ctcaaagtta acctacctgt aactttttaa
1501 aaacttgtaa aataactgac cctcccttcc tgtccgccct cttcccctct aatgctcacg
1561 ctcccaacac aaggtgggca gggaggcacc attcaggaac ctggaccaaa gctgacgagg
1621 ctgggccaag ccagggatgg ggccacagcc agaaccccga gccctacttc caggttctgg
1681 ttagctcagc cccagcccag cccagctgct ctgcccagag ctgggtgagt ggggagacac
1741 ctcagagccc cgcaaaaccc actgaccgga ggcaaaaggc agtggggctg ggggtagttt
1801 tccatggtca cagagaacta gtggtggctc tgagaagggg aggacctctg ggctttgatt
1861 ccatctcctt gtcttttttc tttgttttta gagacagggt cctgctattt cccaagctgg
1921 agtgcagtgg tgcgatcatg gctcactgca gcctcgaact cctgggctca agcaatcctc
1981 ctgagtgatc ccatttctta atcagtgtag ccccaagaag gctggggcta tttaccaggg
2041 tagaaaaagg agcttacctc ccacctttgg tcctaagtcc ctgccccctc cccttcacac
2101 cataactagg taacagtttg ataactaggg aagaaagcag aacagttaag cagccgccac
2161 atccccgctg gctgggggcc tcactccagg aaggggctgg actggctgtc ctttccagtg
2221 gcctggctcc gctgtgtgga tggggagatc ggggccagag gcagaaccct ggtgaggaag
2281 ctccagtcct gctctctacc cagcccatct tgcctccatg gtgcctctgg aggcctctgg
2341 gcctcctcta acaggggctg gtgggcacca agagccaatg gagtagaccc ctggctggta
2401 agggccaagt cccaccggtt gcttctggga aggggtttct aacactagtc tgtgtgctgt
2461 ggttcctggg gtgccctcca ctgccctctg ttcagtaaca gggccttgct aatcgggttg
2521 tcactcaaca aaagtgcttt ggatttaagt tactatcctg gctttgccca acctcagcaa
2581 cctgtaagac tgataatgaa ataaatcatg ttaatcctaa aaaaaaaaaa aaaaaaaaaa
2641 aaaa
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