LOCUS BC006389 2560 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens poly (ADP-ribose) polymerase family, member 16, mRNA
(cDNA clone MGC:12609 IMAGE:4127509), complete cds.
ACCESSION BC006389
VERSION BC006389.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2560)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2560)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52851456.
FEATURES Location/Qualifiers
source 1..2560
/db_xref="H-InvDB:HIT000258915"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12609 IMAGE:4127509"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2560
/gene="PARP16"
/gene_synonym="FLJ20509"
/gene_synonym="FLJ25281"
/db_xref="GeneID:54956"
/db_xref="HGNC:HGNC:26040"
CDS 264..1235
/gene="PARP16"
/gene_synonym="FLJ20509"
/gene_synonym="FLJ25281"
/codon_start=1
/product="poly (ADP-ribose) polymerase family, member 16"
/protein_id="AAH06389.1"
/db_xref="GeneID:54956"
/db_xref="HGNC:HGNC:26040"
/translation="MQPSGWAAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFP
ASYARGDCKDFEALLADASKLPNLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGK
AEFEKIQKLTGAPHTPVPAPDFLFEIEYFDPANAKFYETKGERDLIYAFHGSRLENFH
SIIHNGLHCHLNKTSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVI
DHPDVKCQTKKKDSKEIDRRRARIKHSEGGDIPPKYFVVTNNQLLRVKYLLVYSQKPP
KSRASSQLSWFSSHWFTVMISLYLLLLLIVSVINSSAFQHFWNRAKR"
BASE COUNT 618 a 702 c 607 g 633 t
ORIGIN
1 ggcacgaggc aacctccccg ccgacccgcg gtccaggcct cggtctctct cttcggcggc
61 gagccgcggc ccagaccccg gcagaggaca cttgtcggca cgttctcacc cctgtcatct
121 cagccccctg cctagctcca ccccaggctt gggaacccgg cccctgacgg cccattgtcc
181 gcgggcccag cccccgcgct gaacgcacgc tcgcccttgc ccctaaccag cgcgtctacc
241 ccggcaacgc gcagtgacct gggatgcagc cctcaggctg ggcggccgcc agggaggcgg
301 cgggccgcga catgctggcc gccgacctcc ggtgcagcct cttcgcctcg gccctgcaga
361 gctacaagcg cgactcggtg ctgcggccct tccccgcgtc ctacgcccgc ggcgactgta
421 aggactttga agccctgctt gcagatgcca gcaagttacc taacctgaaa gaacttctcc
481 agtcctccgg agacaaccac aaacgggcct gggacctggt gagctggatt ttatcctcaa
541 aggtcctgac aatccacagt gcagggaagg cagagtttga aaagatccaa aagctgactg
601 gggctcctca cacgcctgtt cctgcaccgg acttcctgtt tgaaattgag tactttgacc
661 cagccaacgc caaattttat gagaccaaag gagaacgaga cctaatctat gcatttcatg
721 gtagccgcct agaaaacttc cattccatta tccacaatgg cctgcactgc catctgaaca
781 agacatcctt gttcggagag gggacctacc tcaccagtga cttgagcctg gccctcatat
841 acagccccca tggccatggg tggcagcaca gcctcctcgg ccccatcctt agctgtgtgg
901 ccgtgtgtga ggtcattgac catccggacg tcaagtgcca aaccaagaag aaggattcca
961 aggagataga tcgcagacga gcgagaatca aacatagtga agggggagac atccctccca
1021 agtacttcgt ggtcaccaat aaccagctgc tgcgagtgaa gtacctcctg gtgtattcac
1081 agaagccacc caagagcagg gcttcgagcc agctctcctg gttttccagc cattggttta
1141 ccgtcatgat atccctgtat ctgctgctgc tgctcatagt gagtgtcatc aactcctctg
1201 ctttccaaca cttttggaat cgtgcgaaaa gataatcttt ctgggcctgg tgtgggggct
1261 acctcaacta tgtgccttat ggtaacttgt tctgtacctc ctatgcctca tgtccagcca
1321 ggttgagcct aggggccagt tgggggacca caggacaatt ttcatatggc ctaaatgtat
1381 ccattgcctt tgatgatgtt cccagccata ctccagtcaa cggggactac tagtccctca
1441 ctcttaggtt ttaggggagt ccttccatct gctccttctt aaactgtcct agggagttgg
1501 cttttcagcc agggccaaag gaaaaagccc tgctgcattt aaaaacaaag tgtccaagct
1561 gtcagtggtg tgtttacaat ctctcctggc agaggttggc cctttctcta atgccttctg
1621 gaaggcggaa aatgtgggaa ctataaatca ctaggcggtt gccttgtttt gacttgagac
1681 acccaagagg aacagtcatg tttctcataa aaatcagtgg gatcattttt gaattccatc
1741 agcctttgta tgtgagtgca aaacatttta acagttttct caaatcaaca aacagccttc
1801 tcctatagct gtacttgccc ccctccccaa aaaaccatgg atgagaaaga aaggagtcag
1861 gggcctgata aaaaatacag acttaatgag caactcaaga tgagaaaact gctctttttc
1921 caaaaattac caactgctga ttacagctga aatggaacca aatgtttgtt ttctgatttt
1981 tttttaatag ctgtttaaca aattagtctt tgctgagtaa aaggggaaat ttctaaacct
2041 agtgcactgt ttggccagtg tccacagcct cttttctggc tgtgttttag agaaagggat
2101 ttgagctata ggctcgcctc ctgttctcat tctcacaaag ctgccttgac tgtggcctgc
2161 aaccacgagt gccatgcttt caggtcttct gtggcctact ggccttcaag acagaggcct
2221 gccccagtgt gccacagatc catgtggatg gagcctcctt cagaggggtc acaggtcttt
2281 gagactcagc ctgggcttta atgtgtagga aaagccttct ggccacccag agagccggag
2341 ccctgcttgc tgtattctct gctcccttct tcctgctggg ttttagccat aatagggccc
2401 ggtacgattt gggagtgaca tttctgtaaa gaagaggaaa aatcattttt ctataatttg
2461 taaagttgtg aaagagccac taccacagtt tttacattga ttattggaac atttcagaat
2521 aaataaagat attttcttaa tgaaaaaaaa aaaaaaaaaa
//