LOCUS BC006358 2994 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens microtubule-associated protein 1S, mRNA (cDNA clone
IMAGE:4125792), partial cds.
ACCESSION BC006358
VERSION BC006358.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2994)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2994)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC006358.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: g Column: 18.
FEATURES Location/Qualifiers
source 1..2994
/db_xref="H-InvDB:HIT000032781"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4125792"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2994
/gene="MAP1S"
/gene_synonym="FLJ10669"
/gene_synonym="MAP8"
/gene_synonym="VCY2IP-1"
/db_xref="GeneID:55201"
/db_xref="HGNC:HGNC:15715"
/db_xref="MIM:607573"
CDS <1..2891
/gene="MAP1S"
/gene_synonym="FLJ10669"
/gene_synonym="MAP8"
/gene_synonym="VCY2IP-1"
/codon_start=3
/product="MAP1S protein"
/protein_id="AAH06358.2"
/db_xref="GeneID:55201"
/db_xref="HGNC:HGNC:15715"
/db_xref="MIM:607573"
/translation="LYDELRNLLLDPASHKLLVLAGPCLEETGELLLQTGGFSPHHFL
QVLKDREIRDILATTPPPVQPPILTITCPTFGDWAQLAPAVPGLQGALRLQLRLNPPA
QLPNSEGLCEFLEYVAESLEPPSPFELLEPPTSGGFLRLGRPCCYIFPGGLGDAAFFA
VNGFTVLVNGGSNPKSSFWKLVRHLDRVDAVLVTHPGADSLPGLNSLLRRKLAERSEV
AAGGGSWDDRLRRLISPNLGVVFFNACEAASRLARGEDEAELALSLLAQLGITPLPLS
RGPVPAKPTVLFEKMGVGRLDMYVLHPPSAGAERTLACVCALLVWHPAGPGEKVVRVL
FPGCTPPACLLDGLVRLQHLRFLREPVVTPQDLEGPGRAESKESVGSRDSSKREGLLA
THPRPGQERPGVARKEPARAEAPRKTEKEAKTPRELKKDPKPSVSRTQPREVRRAASS
VPNLKKTNAQAAPKPRKAPSTSHSGFPPVANGPRSPPSLRCGEASPPSAACGSPASQL
VATPSLELGPIPAGEEKALELPLAASSIPRPRTPSPESHRSPAEGSERLSLSPLRGGE
AGPDASPTVTTPTVTTPSLPAEVGSPHSTEVDESLSVSFEQVLPPSAPTSEAGLSLPL
RGPRARRSASPHDVDLCLVSPCEFEHRKAVPMAPAPASPGSSNDSSARSQERAGGLGA
EETPPTSVSESLPTLSDSDPVPLAPGAADSDEDTEGFGVPRHDPLPDPLKVPPPLPDP
SSICMVDPEMLPPKTARQTENVSRTRKPLARPNSRAAAPKATPVAAAKTKGLAGGDRA
SRPLSARSEPSEKGGRAPLSRKSSTPKTATRGPSGSASSRPGVSATPPKSPVYLDLAY
LPSGSSAHLVDEEFFQRVRALCYVISGQDQRKEEGMRAVLDALLASKQHWDRDLQVTL
IPTFDSVAMHTWYAETHARHQALGITVLGSNSMVSMQDDAFPACKVEF"
BASE COUNT 512 a 1104 c 936 g 442 t
ORIGIN
1 ccctgtatga tgagctccgg aaccttctgt tggaccctgc ctctcacaag ctactggtgt
61 tggctgggcc ctgcctggag gagacggggg agctgctgct acagacaggg ggcttctcgc
121 ctcaccactt cctccaggtc ctgaaggaca gagagatccg ggacatcctg gccaccacgc
181 ccccacctgt gcagccgccc atactcacca tcacctgccc caccttcggt gactgggctc
241 agctggcacc cgctgtgcct ggccttcagg gggcgctccg gctccagctg cggctgaacc
301 ccccggcgca gctgcccaac tctgagggcc tgtgcgaatt cctggagtac gtggctgagt
361 ctctggagcc accgtccccc ttcgagctgc tggagccccc gacctccggg ggcttcctca
421 ggctgggccg gccctgctgc tacatcttcc ctggaggcct cggggatgcc gccttcttcg
481 ccgtcaatgg cttcactgtg ctggtcaacg gtggctcaaa ccccaagtcc agtttctgga
541 agctggtgcg gcacctggac cgcgtggatg ccgtgctggt gacccaccct ggcgccgaca
601 gcctccccgg cctcaacagc ctgctgcggc gcaaactggc ggagcgctcc gaggtggctg
661 ctggtggggg ctcctgggac gacaggctgc gcaggctcat ctcccccaac ctgggggtcg
721 tgttcttcaa cgcctgcgag gccgcgtcgc ggctggcgcg cggcgaggat gaggcggagc
781 tggcgctgag cctcctggcg cagctgggca tcacgcctct gccactcagc cgcggccccg
841 tgccagccaa acccaccgtg ctcttcgaga agatgggcgt gggccggctg gacatgtatg
901 tgctgcaccc gccctccgcc ggcgccgagc gcacgctggc ctgtgtgtgc gccctgctgg
961 tgtggcaccc cgccggcccc ggcgagaagg tggtgcgcgt gctgttcccc ggttgcaccc
1021 cgcccgcctg cctcctggac ggcctggtcc gcctgcagca cttgaggttc ctgcgagagc
1081 ccgtggtgac gccccaggac ctggaggggc cggggcgagc cgagagcaaa gagagcgtgg
1141 gctcccggga cagctcgaag agagagggcc tcctggccac ccaccctaga cctggccagg
1201 agcgccctgg ggtggcccgc aaggagccag cacgggctga ggccccacgc aagactgaga
1261 aagaagccaa gaccccccgg gagttgaaga aagaccccaa accgagtgtc tcccggaccc
1321 agccgcggga ggtgcgccgg gcagcctctt ctgtgcccaa cctcaagaag acgaatgccc
1381 aggcggcacc caagccccgc aaagcgccca gcacgtccca ctctggcttc ccgccggtgg
1441 caaatggacc ccgcagcccg cccagcctcc gatgtggaga agccagcccc cccagtgcgg
1501 cctgcggctc tccggcctcc cagctggtgg ccacgcccag cctggagctg gggccgatcc
1561 cagccgggga ggagaaggca ctggagctgc ctttggccgc cagctcaatc ccaaggccac
1621 gcacaccctc ccctgagtcc caccggagcc ccgcagaggg cagcgagcgg ctgtcgctga
1681 gcccactgcg gggcggggag gccgggccag acgcctcacc cacagtgacc acacccacgg
1741 tgaccacgcc ctcactaccc gcagaggtgg gctccccgca ctcgaccgag gtggacgagt
1801 ccctgtcggt gtcctttgag caggtgctgc cgccatccgc ccccaccagt gaggctgggc
1861 tgagcctccc gctgcgtggc ccccgggcgc ggcgctcggc ttccccacac gatgtggacc
1921 tgtgcctggt gtcaccctgt gaatttgagc atcgcaaggc ggtgccaatg gcaccggcac
1981 ctgcgtcccc cggcagctcg aatgacagca gtgcccggtc acaggaacgg gcaggtgggc
2041 tgggggccga ggagacgcca cccacatcgg tcagcgagtc cctgcccacc ctgtctgact
2101 cggatcccgt gcccctggcc cccggtgcgg cagactcaga cgaagacaca gagggctttg
2161 gagtccctcg ccacgaccct ttgcctgacc ccctcaaggt ccccccacca ctgcctgacc
2221 catccagcat ctgcatggtg gaccccgaga tgctgccccc caagacagca cggcaaacgg
2281 agaacgtcag ccgcacccgg aagcccctgg cccgccccaa ctcacgcgct gccgccccca
2341 aagccactcc agtggctgct gccaaaacca aggggcttgc tggtggggac cgtgccagcc
2401 gaccactcag tgcccggagt gagcccagtg agaagggagg ccgggcaccc ctgtccagaa
2461 agtcctcaac ccccaagact gccactcgag gcccgtcggg gtcagccagc agccggcccg
2521 gggtgtcagc caccccaccc aagtccccgg tctacctgga cctggcctac ctgcccagcg
2581 ggagcagcgc ccacctggtg gatgaggagt tcttccagcg cgtgcgcgcg ctctgctacg
2641 tcatcagtgg ccaggaccag cgcaaggagg aaggcatgcg ggccgtcctg gacgcgctac
2701 tggccagcaa gcagcattgg gaccgtgacc tgcaggtgac cctgatcccc actttcgact
2761 cggtggccat gcatacgtgg tacgcagaga cgcacgcccg gcaccaggcg ctgggcatca
2821 cggtgttggg cagcaacagc atggtgtcca tgcaggatga cgccttcccg gcctgcaagg
2881 tggagttcta gccccatcgc cgacacgccc cccactcagc ccagcccgcc tgtccctaga
2941 ttcagccaca tcagaaataa actgtgacta cacttgaaaa aaaaaaaaaa aaaa
//