LOCUS BC006345 1985 bp mRNA linear HUM 11-DEC-2003 DEFINITION Homo sapiens lysosomal-associated membrane protein 1, mRNA (cDNA clone IMAGE:4100802), partial cds. ACCESSION BC006345 VERSION BC006345.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1985) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1985) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC006345.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: c Column: 6. FEATURES Location/Qualifiers source 1..1985 /db_xref="H-InvDB:HIT000086641" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4100802" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1985 /gene="LAMP1" /gene_synonym="CD107a" /gene_synonym="LAMPA" /gene_synonym="LGP120" /db_xref="GeneID:3916" /db_xref="MIM:153330" CDS <1..929 /gene="LAMP1" /gene_synonym="CD107a" /gene_synonym="LAMPA" /gene_synonym="LGP120" /codon_start=3 /product="LAMP1 protein" /protein_id="AAH06345.2" /db_xref="GeneID:3916" /db_xref="MIM:153330" /translation="RYSVQLMSFVYNLSDTHLFPNASSKEIKTVESITDIRADIDKKY RCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRCEQDRPSPTTAPPAPPSPSPS PVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTTVTRLLNINPNKTSASGSC GAHLVTLELHSEGTTVLLFQFGMNASSSRFFLQGIQLNTILPDARDPAFKAANGSLRA LQATVGNSYKCNAEEHVRVTKAFSVNIFKVWVQAFKVEGGQFGSVEECLLDENSMLIP IAVGGALAGLVLIVLIAYLVGRKRSHAGYQTI" misc_feature 3..926 /gene="LAMP1" /gene_synonym="CD107a" /gene_synonym="LAMPA" /gene_synonym="LGP120" /note="Lamp; Region: Lysosome-associated membrane glycoprotein (Lamp)" /db_xref="CDD:pfam01299" BASE COUNT 469 a 490 c 547 g 479 t ORIGIN 1 cacgttacag cgtccagctc atgagttttg tttataactt gtcagacaca caccttttcc 61 ccaatgcgag ctccaaagaa atcaagactg tggaatctat aactgacatc agggcagata 121 tagataaaaa atacagatgt gttagtggca cccaggtcca catgaacaac gtgaccgtaa 181 cgctccatga tgccaccatc caggcgtacc tttccaacag cagcttcagc aggggagaga 241 cacgctgtga acaagacagg ccttccccaa ccacagcgcc ccctgcgcca cccagcccct 301 cgccctcacc cgtgcccaag agcccctctg tggacaagta caacgtgagc ggcaccaacg 361 ggacctgcct gctggccagc atggggctgc agctgaacct cacctatgag aggaaggaca 421 acacgacggt gacaaggctt ctcaacatca accccaacaa gacctcggcc agcgggagct 481 gcggcgccca cctggtgact ctggagctgc acagcgaggg caccaccgtc ctgctcttcc 541 agttcgggat gaatgcaagt tctagccggt ttttcctaca aggaatccag ttgaatacaa 601 ttcttcctga cgccagagac cctgccttta aagctgccaa cggctccctg cgagcgctgc 661 aggccacagt cggcaattcc tacaagtgca acgcggagga gcacgtccgt gtcacgaagg 721 cgttttcagt caatatattc aaagtgtggg tccaggcttt caaggtggaa ggtggccagt 781 ttggctctgt ggaggagtgt ctgctggacg agaacagcat gctgatcccc atcgctgtgg 841 gtggtgccct ggcggggctg gtcctcatcg tcctcatcgc ctacctcgtc ggcaggaaga 901 ggagtcacgc aggctaccag actatctagc ctggtgcacg caggcacagc agctgcaggg 961 gcctctgttc ctttctctgg gcttagggtc ctgtcgaagg ggaggcacac tttctggcaa 1021 acgtttctca aatctgcttc atccaatgtg aagttcatct tgcagcattt actatgcaca 1081 acagagtaac tatcgaaatg acggtgttaa ttttgctaac tgggttaaat attttgctaa 1141 ctggttaaac attaatattt accaaagtag gattttgagg gtgggggtgc tctctctgag 1201 ggggtggggg tgccgctgtc tctgaggggt gggggtgccg ctgtctctga ggggtggggg 1261 tgccgctctc tctgaggggg tgggggtgcc gctctctctg agggggtggg ggtgccgctc 1321 tctctgaggg ggtgggggtg ctgctctctc cgaggggtgg aatgccgctg tctctgaggg 1381 gtgggggtgc cgctctaaat tggctccata tcatttgagt ttagggttct ggtgtttggt 1441 ttcttcattc tttactgcac tcagatttaa gccttacaaa gggaaagcct ctggccgtca 1501 cacgtaggac gcatgaaggt cactcgtggt gaggctgaca tgctcacaca ttacaacagt 1561 agagagggaa aatcctaaga cagaggaact ccagagatga gtgtctggag cgcttcagtt 1621 cagctttaaa ggccaggacg ggccacacgt ggctggcggc ctcgttccag tggcggcacg 1681 tccttgggcg tctctaatgt ctgcagctca agggctggca cttttttaaa tataaaaatg 1741 ggtgttattt ttattttttt ttgtaaagtg atttttggtc ttctgttgac attcggggtg 1801 atcctgttct gcgctgtgta caatgtgaga tcggtgcgtt ctcctgatgt tttgccgtgg 1861 cttggggatt gtacacggga ccagctcacg taatgcattg cctgtaacaa tgtaataaaa 1921 agcctctttc tttttaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1981 aaaaa //