LOCUS BC006339 1561 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 3-phosphoinositide dependent protein kinase-1, mRNA
(cDNA clone MGC:12726 IMAGE:4079551), complete cds.
ACCESSION BC006339
VERSION BC006339.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1561)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1561)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006339.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60498971.
FEATURES Location/Qualifiers
source 1..1561
/db_xref="H-InvDB:HIT000050467"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12726 IMAGE:4079551"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1561
/gene="PDPK1"
/gene_synonym="MGC20087"
/gene_synonym="MGC35290"
/gene_synonym="PDK1"
/gene_synonym="PkB-like"
/gene_synonym="PkB-like 1"
/gene_synonym="PRO0461"
/db_xref="GeneID:5170"
/db_xref="HGNC:HGNC:8816"
/db_xref="MIM:605213"
CDS 111..1400
/gene="PDPK1"
/gene_synonym="MGC20087"
/gene_synonym="MGC35290"
/gene_synonym="PDK1"
/gene_synonym="PkB-like"
/gene_synonym="PkB-like 1"
/gene_synonym="PRO0461"
/codon_start=1
/product="3-phosphoinositide dependent protein kinase-1"
/protein_id="AAH06339.2"
/db_xref="GeneID:5170"
/db_xref="HGNC:HGNC:8816"
/db_xref="MIM:605213"
/translation="MARTTSQLYDAVPIQSSVVLCSCPSPSMVRTQTESSTPPGIPGG
SRQGPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLAREL
ATSREYATRANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE
YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV
TWENLHQQTPPKLTAYLPAMSEDDEDCYGNYDNLLSQFGCMQVSSSSSSHSLSASDTG
LPQRSGSNIEQYIHDLDSNSFELDLQFSEDEKRLLLEKQAGGNPWHQFVENNLILKMG
PVDKRKGLFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEAKNFKTFFVHTP
NRTYYLMDPSGNAHKWCRKIQEVWRQRYQSHPDAAVQ"
BASE COUNT 378 a 434 c 437 g 312 t
ORIGIN
1 cgcaggatga gggcggccat tgctggggct ccgcttcggg gaggaggacg ctgaggaggc
61 gccgagccgc gcagcgctgc gggggaggcg cccgcgccga cgcggggccc atggccagga
121 ccaccagcca gctgtatgac gccgtgccca tccagtccag cgtggtgtta tgttcctgcc
181 catccccatc aatggtgagg acccagactg agtccagcac gccccctggc attcctggtg
241 gcagcaggca gggccccgcc atggacggca ctgcagccga gcctcggccc ggcgccggct
301 ccctgcagca tgcccagcct ccgccgcagc ctcggaagaa gcggcctgag gacttcaagt
361 ttgggaaaat ccttggggaa ggctcttttt ccacggttgt cctggctcga gaactggcaa
421 cctccagaga atatgcgacc agggccaact cattcgtggg aacagcgcag tacgtttctc
481 cagagctgct cacggagaag tccgcctgta agagttcaga cctttgggct cttggatgca
541 taatatacca gcttgtggca ggactcccac cattccgagc tggaaacgag tatcttatat
601 ttcagaagat cattaagttg gaatatgact ttccagaaaa attcttccct aaggcaagag
661 acctcgtgga gaaacttttg gttttagatg ccacaaagcg gttaggctgt gaggaaatgg
721 aaggatacgg acctcttaaa gcacacccgt tcttcgagtc cgtcacgtgg gagaacctgc
781 accagcagac gcctccgaag ctcaccgctt acctgccggc tatgtcggaa gacgacgagg
841 actgctatgg caattatgac aatctcctga gccagtttgg ctgcatgcag gtgtcttcgt
901 cctcctcctc acactccctg tcagcctccg acacgggcct gccccagagg tcaggcagca
961 acatagagca gtacattcac gatctggact cgaactcctt tgaactggac ttacagtttt
1021 ccgaagatga gaagaggttg ttgttggaga agcaggctgg cggaaaccct tggcaccagt
1081 ttgtagaaaa taatttaata ctaaagatgg gcccagtgga taagcggaag ggtttatttg
1141 caagacgacg acagctgttg ctcacagaag gaccacattt atattatgtg gatcctgtca
1201 acaaagttct gaaaggtgaa attccttggt cacaagaact tcgaccagag gccaagaatt
1261 ttaaaacttt ctttgtccac acgcctaaca ggacgtatta tctgatggac cccagcggga
1321 acgcacacaa gtggtgcagg aagatccagg aggtttggag gcagcgatac cagagccacc
1381 cggacgccgc tgtgcagtga cgtggcctgc ggccgggctg cccttcgctg ccgggacacc
1441 tgccccagcg cggcttggcc gccatccggg acgcttccag accacctgcc agccatcaca
1501 aggggaacgc agaggcggaa accttgcagc atttttattt aaaaaaaaaa aaaaaaaaaa
1561 a
//