LOCUS BC006333 1789 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tripartite motif-containing 14, mRNA (cDNA clone
MGC:12564 IMAGE:4299815), complete cds.
ACCESSION BC006333
VERSION BC006333.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1789)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1789)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC006333.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: m Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15208662.
FEATURES Location/Qualifiers
source 1..1789
/db_xref="H-InvDB:HIT000032764"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12564 IMAGE:4299815"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1789
/gene="TRIM14"
/gene_synonym="KIAA0129"
/db_xref="GeneID:9830"
/db_xref="HGNC:HGNC:16283"
/db_xref="MIM:606556"
CDS 19..1347
/gene="TRIM14"
/gene_synonym="KIAA0129"
/codon_start=1
/product="tripartite motif-containing 14"
/protein_id="AAH06333.1"
/db_xref="GeneID:9830"
/db_xref="HGNC:HGNC:16283"
/db_xref="MIM:606556"
/translation="MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVC
ALCPVLGAHRGHPVGLALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKA
NAESSKTWLKGKFTELRLLLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMND
LSNRVWSISQEPDPVQRLQAYTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEA
VESTLQTPLDIRLKESINCQLSDPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTM
HARLRLSADRLTVRCGLLGSLGPVPVLRFDALWQVLARDCFATGRHYWEVDVQEAGAG
WWVGAAYASLRRRGASAAARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLG
VFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLYPALRLWEGAISIPRLP"
BASE COUNT 379 a 548 c 542 g 320 t
ORIGIN
1 cggaggaggt ggagatgaat ggcgggcgcg gcgaccggga gccggacccc tgggaggtcg
61 gagcttgtcg agggatgcgg ctggcgctgc ccggagcatg gcgaccgcgt ggctgagctc
121 ttctgtcgcc gctgccgccg ctgcgtgtgc gcgctttgcc cggtgctggg cgcgcaccgt
181 ggccaccctg tgggcctggc gctggaggca gcggtgcacg tgcagaaact cagccaagaa
241 tgtttaaagc agctggcaat caagaagcag cagcacattg acaacataac ccagatagaa
301 gatgccaccg agaagctcaa ggctaatgca gagtcaagta aaacctggct gaaggggaaa
361 ttcactgaac tcagattact acttgacgaa gaggaagcgc tggccaagaa attcattgat
421 aaaaacacgc agcttaccct ccaggtgtac agggaacaag ctgactcttg cagagagcaa
481 cttgacatca tgaatgatct ctccaacagg gtctggagta tcagccagga gcccgatcct
541 gtccagaggc ttcaggcata cacggccacc gagcaggaga tgcagcagca gatgagcctc
601 ggggagctgt gccatcccgt gcccctctcc tttgagcccg tcaagagctt ctttaagggc
661 ctcgtggaag ccgtggagag tacattacag acgccattgg acattcgcct taaggaaagc
721 ataaactgcc agctctcaga cccttccagc accaagccag gtaccttgtt gaaaaccagc
781 ccctcaccag agcgatcgct attgctgaaa tacgcgcgca cgcccacgct ggatcctgac
841 acgatgcacg cgcgcctgcg cctgtccgcc gatcgcctga cggtgcgctg cggcctgctg
901 ggcagcctgg ggcccgtgcc cgtgctgcgg ttcgacgcgc tctggcaagt gctggctcgt
961 gactgcttcg ccaccggccg ccactactgg gaggttgacg tgcaggaggc gggcgccggc
1021 tggtgggtgg gcgcggccta cgcctccctt cggcgccgcg gggcctcggc cgccgcccgc
1081 ctgggctgca accgccagtc ctggtgcctc aagcgctacg accttgagta ctgggccttc
1141 cacgacggcc agcgcagccg cctgcggccc cgcgacgacc tcgaccggct cggcgtcttc
1201 ctggactacg aggccggcgt cctcgccttc tacgacgtga cgggcggcat gagccacctg
1261 cataccttcc gcgccacgtt ccaggagccg ctctacccgg ccctgcggct ctgggagggg
1321 gccatcagca tcccccggct gccctagggg ccaggaccgg cgtgacagcc tccagaatgt
1381 catggaagca gaatcgtaca gtatgttccc ttctgcatat gctgctttct cactcagcat
1441 catttccttg agatgcatcc aggctgctgc acgcatcaat agttcattcc tggctgggcg
1501 cggtggctca cgcctgtaat cccagcgctt tgggaggccg atgtgggtgg atcacaaggt
1561 caggagtttg agactagcct ggccaagatg gtgaaacccc atctctgcaa aaaatacaaa
1621 aattagccgg gcaccatggc atgtgcctgt aatccctgct actcaggagg ctgaggaagg
1681 agaatcactt gaacccgggc agcggaggtt gcagtgagcc gagatcacac cactgcactc
1741 cagcctgggc aatagagtga gactccgttt caaaaaaaaa aaaaaaaaa
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