LOCUS BC006304 2800 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fascin homolog 1, actin-bundling protein
(Strongylocentrotus purpuratus), mRNA (cDNA clone MGC:13298
IMAGE:4100996), complete cds.
ACCESSION BC006304
VERSION BC006304.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2800)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2800)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006304.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49472815.
FEATURES Location/Qualifiers
source 1..2800
/db_xref="H-InvDB:HIT000032742"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13298 IMAGE:4100996"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2800
/gene="FSCN1"
/gene_synonym="fascin"
/gene_synonym="p55"
/db_xref="GeneID:6624"
/db_xref="HGNC:HGNC:11148"
/db_xref="MIM:602689"
CDS 115..1596
/gene="FSCN1"
/gene_synonym="fascin"
/gene_synonym="p55"
/codon_start=1
/product="fascin homolog 1, actin-bundling protein
(Strongylocentrotus purpuratus)"
/protein_id="AAH06304.1"
/db_xref="GeneID:6624"
/db_xref="HGNC:HGNC:11148"
/db_xref="MIM:602689"
/translation="MTANGTAEAVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQ
IWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWS
LQSEAHRRYFGGTEDRLSCFAQTVSPAEKWSVHIAMHPQVNIYSVTRKRYAHLSARPA
DEIAVDRDVPWGVDSLITLAFQDQRYSVQTADHRFLRHDGRLVARPEPATGYTLEFRS
GKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAANERNVSTR
QGMDLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTASSKNASC
YFDIEWRDRRITLRASNGKFVTSKKNGQLAASVETAGDSELFLMKLINRPIIVFRGEH
GFIGCRKVTGTLDANRSSYDVFQLEFNDGAYNIKDSTGKYWTVGSDSVVTSSGDTPVD
FFFEFCDYNKVAIKVGGRYLKGDHAGVLKASAETVDPASLWEY"
BASE COUNT 501 a 948 c 857 g 494 t
ORIGIN
1 gctgcggagg gtgcgtgcgg gccgcggcag ccgaacaaag gagcaggggc gccgccgcag
61 ggacccgcca cccacctccc ggggccgcgc agcggcctct cgtctactgc caccatgacc
121 gccaacggca cagccgaggc ggtgcagatc cagttcggcc tcatcaactg cggcaacaag
181 tacctgacgg ccgaggcgtt cgggttcaag gtgaacgcgt ccgccagcag cctgaagaag
241 aagcagatct ggacgctgga gcagccccct gacgaggcgg gcagcgcggc cgtgtgcctg
301 cgcagccacc tgggccgcta cctggcggcg gacaaggacg gcaacgtgac ctgcgagcgc
361 gaggtgcccg gtcccgactg ccgtttcctc atcgtggcgc acgacgacgg tcgctggtcg
421 ctgcagtccg aggcgcaccg gcgctacttc ggcggcaccg aggaccgcct gtcctgcttc
481 gcgcagacgg tgtcccccgc cgagaagtgg agcgtgcaca tcgccatgca ccctcaggtc
541 aacatctaca gcgtcacccg taagcgctac gcgcacctga gcgcgcggcc ggccgacgag
601 atcgccgtgg accgcgacgt gccctggggc gtcgactcgc tcatcaccct cgccttccag
661 gaccagcgct acagcgtgca gaccgccgac caccgcttcc tgcgccacga cgggcgcctg
721 gtggcgcgcc ccgagccggc cactggctac acgctggagt tccgctccgg caaggtggcc
781 ttccgcgact gcgagggccg ttacctggcg ccgtcggggc ccagcggcac gctcaaggcg
841 ggcaaggcca ccaaggtggg caaggacgag ctctttgctc tggagcagag ctgcgcccag
901 gtcgtgctgc aggcggccaa cgagaggaac gtgtccacgc gccagggtat ggacctgtct
961 gccaatcagg acgaggagac cgaccaggag accttccagc tggagatcga ccgcgacacc
1021 aaaaagtgtg ccttccgtac ccacacgggc aagtactgga cgctgacggc caccgggggc
1081 gtgcagtcca ccgcctccag caagaatgcc agctgctact ttgacatcga gtggcgtgac
1141 cggcgcatca cactgagggc gtccaatggc aagtttgtga cctccaagaa gaatgggcag
1201 ctggccgcct cggtggagac agcaggggac tcagagctct tcctcatgaa gctcatcaac
1261 cgccccatca tcgtgttccg cggggagcat ggcttcatcg gctgccgcaa ggtcacgggc
1321 accctggacg ccaaccgctc cagctatgac gtcttccagc tggagttcaa cgatggcgcc
1381 tacaacatca aagactccac aggcaaatac tggacggtgg gcagtgactc cgtggtcacc
1441 agcagcggcg acactcctgt ggacttcttc ttcgagttct gcgactataa caaggtggcc
1501 atcaaggtgg gcgggcgcta cctgaagggc gaccacgcag gcgtcctgaa ggcctcggcg
1561 gaaaccgtgg accccgcctc gctctgggag tactagggcc ggcccgtcct tccccgcccc
1621 tgcccacatg gcggctcctg ccaaccctcc ctgctaaccc cttctccgcc aggtgggctc
1681 cagggcggga ggcaagcccc cttgcctttc aaactggaaa ccccagagaa aacggtgccc
1741 ccacctgtcg cccctatgga ctccccactc tcccctccgc ccgggttccc tactcccctc
1801 gggtcagcgg ctgcggcctg gccctgggag ggatttcaga tgcccctgcc ctcttgtctg
1861 ccacggggcg agtctggcac ctctttcttc tgacctcaga cggctctgag ccttatttct
1921 ctggaagcgg ctaagggacg gttgggggct gggagccctg ggcgtgtagt gtaactggaa
1981 tcttttgcct ctcccagcca cctcctccca gccccccagg agagctgggc acatgtccca
2041 agcctgtcag tggccctccc tggtgcactg tccccgaaac ccctgcttgg gaagggaagc
2101 tgtcgggtgg gctaggactg acccttgtgg tgtttttttg ggtggtggct ggaaacagcc
2161 cctctcccac gtggcagagg ctcagcctgg ctcccttccc tggagcggca gggcgtgacg
2221 gccacagggt ctgcccgctg cacgttctgc caaggtggtg gtggcgggcg ggtaggggtg
2281 tgggggccgt cttcctcctg tctctttcct ttcaccctag cctgactgga agcagaaaat
2341 gaccaaatca gtattttttt taatgaaata ttattgctgg aggcgtccca ggcaagcctg
2401 gctgtagtag cgagtgatct ggcggggggc gtctcagcac cctccccagg gggtgcatct
2461 cagccccctc tttccgtcct tcccgtccag ccccagccct gggcctgggc tgccgacacc
2521 tgggccagag cccctgctgt gattggtgct ccctgggcct cccgggtgga tgaagccagg
2581 cgtcgccccc tccgggagcc ctggggtgag ccgccggggc cccccctgct gccagcctcc
2641 cccgtcccca acatgcatct cactctgggt gtcttggtct tttatttttt gtaagtgtca
2701 tttgtataac tctaaacgcc catgatagta gcttcaaact ggaaatagcg aaataaaata
2761 actcagtctg cagccccaaa aaaaaaaaaa aaaaaaaaaa
//