LOCUS BC006281 2313 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SH2 domain containing 3A, mRNA (cDNA clone MGC:10535
IMAGE:3958342), complete cds.
ACCESSION BC006281
VERSION BC006281.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2313)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2313)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006281.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: d Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885524.
FEATURES Location/Qualifiers
source 1..2313
/db_xref="H-InvDB:HIT000032723"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10535 IMAGE:3958342"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2313
/gene="SH2D3A"
/gene_synonym="NSP1"
/db_xref="GeneID:10045"
/db_xref="HGNC:HGNC:16885"
/db_xref="MIM:604721"
CDS 132..1862
/gene="SH2D3A"
/gene_synonym="NSP1"
/codon_start=1
/product="SH2 domain containing 3A"
/protein_id="AAH06281.1"
/db_xref="GeneID:10045"
/db_xref="HGNC:HGNC:16885"
/db_xref="MIM:604721"
/translation="MQVPQDGEDLAGQPWYHGLLSRQKAEALLQQNGDFLVRASGSRG
GNPVISCRWRGSALHFEVFRVALRPRPGRPTALFQLEDEQFPSIPALVHSYMTGRRPL
SQATGAVVSRPVTWQGPLRRSFSEDTLMDGPARIEPLRARKWSNSQPADLAHMGRSRE
DPAGMEASTMPISALPRTSSDPVLLKAPAPLGTVADSLRASDGQLQAKAPTKPPRTPS
FELPDASERPPTYCELVPRVPSVQGTSPSQSCPEPEAPWWEAEEDEEEENRCFTRPQA
EISFCPHDAPSCLLGPQNRPLEPQVLHTLRGLFLEHHPGSTALHLLLVDCQATGLLGV
TRDQRGNMGVSSGLELLTLPHGHHLRLELLERHQTLALAGALAVLGCSGPLEERAAAL
RGLVELALALRPGAAGDLPGLAAVMGALLMPQVSRLEHTWRQLRRSHTEAALAFEQEL
KPLMRALDEGAGPCDPGEVALPHVAPMVRLLEGEEVAGPLDESCERLLRTLHGARHMV
RDAPKFRKVAAQRLRGFRPNPELREALTTGFVRRLLWGSRGAGAPRAERFEKFQRVLG
VLSQRLEPDR"
BASE COUNT 461 a 727 c 723 g 402 t
ORIGIN
1 agccgcggag cctcagcttc cgcctggacc cagcctcgtg ggagccccgc gggtcctgcc
61 cagatgtgga agactgaggc ctgttgaaag tgcagagctc agccctggca ccctctgttc
121 ccaagagctc catgcaggtg ccacaggatg gagaagacct tgctggccaa ccttggtacc
181 acggcctcct gtcccgccag aaggctgaag ctcttcttca gcaaaatggc gacttcctgg
241 ttcgcgcctc tgggtcccgt gggggcaacc ccgtgatctc ctgccgctgg cggggctcag
301 ccctccattt tgaggtgttc cgtgtggccc tgcgtccccg gccaggccga cccacagccc
361 tctttcaact ggaggatgag caattcccca gcataccggc tctggttcac agttatatga
421 caggcaggcg cccactgtcc caggccacag gggctgtggt ctccaggcct gtgacttggc
481 aggggcctct gcgacgcagc tttagcgagg acaccctgat ggatggccca gctcggatag
541 agcctctcag ggcaaggaag tggagcaaca gtcagcctgc agatttggca catatggggc
601 ggtcaagaga agaccccgct gggatggaag cctccaccat gcccatatct gccttgcccc
661 gaacgagcag tgacccggtg ttgctgaagg cccctgctcc cctgggaact gttgccgaca
721 gtctcagggc ctccgatggg cagcttcaag ccaaggcacc aacgaagccc ccccggacac
781 cctccttcga actgcctgat gcctctgaac gtcccccgac gtactgcgag ctggtgcccc
841 gagtgcccag tgtccaggga acatccccga gccaaagctg cccagagcca gaggccccat
901 ggtgggaggc cgaggaggat gaggaggaag agaatagatg ttttacaaga ccacaggctg
961 agatctcttt ctgcccccat gatgccccct cctgcctgct gggcccccag aatcggcccc
1021 tggaacccca agtcctgcat accctccgtg gcctgttcct ggagcaccat cctgggagca
1081 ccgcccttca cctgctattg gtagactgcc aggccacagg cctcctggga gtgaccagag
1141 atcagcgggg caacatggga gtctcatctg gcctggagct gctcactctt ccccatggac
1201 accacttgag gttggaactg ctggagaggc atcagacact ggcgctggcc ggggcgctgg
1261 cggtgctggg ctgctcgggg ccgctggagg agcgcgcagc cgcactgagg ggactggtag
1321 agctggcgct ggcgctgcgg ccaggggcgg cgggggacct gcccgggctg gctgcagtca
1381 tgggcgccct gctcatgccc caggtgtccc ggttggagca cacgtggcgc cagctccgaa
1441 ggagccacac ggaggctgcg ctggcctttg agcaggagct gaagccgctg atgcgggctc
1501 tggatgaggg cgctggaccc tgcgaccccg gcgaggtggc gctgccgcac gtggcaccca
1561 tggttcgcct actggagggc gaggaagtcg cggggccgct ggacgagagc tgtgagcggc
1621 tgttgcgcac cctgcacggg gcgcgtcaca tggtccggga cgcacccaaa ttccgcaagg
1681 tggcagccca gcgcctgcga ggattccggc ctaacccgga gctgagggag gccctgacca
1741 ccggcttcgt gcggaggctg ctctggggta gccggggcgc gggagctccg cgcgctgaac
1801 gctttgagaa gttccagcgc gtcctcggcg tcctgtcgca gcgcctggag cctgaccgct
1861 gagagcgcag acacccttct tcacacccgg gacccccagg tttttgcgaa ccccagaaga
1921 gaccaaagga gtcgtcccag gctcctcgcg cctcaggtgg aatcctgccc tgtgcctcac
1981 agaagaggtg gggaccgcag tcagggtcac ctggaccatg gtgaacatgt gacctgcaga
2041 tctggcatca gaggccagag ttcaaatgtg actccacctc ttaaaagccg tgatttctag
2101 cagttgactt cacctctgtg tcggccttta acaaaatcat agccatacag cagctcaggc
2161 ctgtaatctc agcactttgg gaggccgagg cggaaggaag gcttgaggcc aggagttcaa
2221 gaccagccag ggcaacatgg tgagacctca tctctacaaa aactgaaaaa taaaaaactt
2281 ttaaaaaatg taaaaaaaaa aaaaaaaaaa aaa
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