LOCUS BC006279 2773 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens zinc finger protein 627, mRNA (cDNA clone
IMAGE:4053041), partial cds.
ACCESSION BC006279
VERSION BC006279.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2773)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2773)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006279.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: b Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42734386.
FEATURES Location/Qualifiers
source 1..2773
/db_xref="H-InvDB:HIT000032721"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4053041"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2773
/gene="ZNF627"
/gene_synonym="FLJ90365"
/db_xref="GeneID:199692"
/db_xref="HGNC:HGNC:30570"
CDS <1..1515
/gene="ZNF627"
/gene_synonym="FLJ90365"
/codon_start=1
/product="ZNF627 protein"
/protein_id="AAH06279.2"
/db_xref="GeneID:199692"
/db_xref="HGNC:HGNC:30570"
/translation="PTRARVSVSPRGPRCLRRSLCRAVTCTGRGSRREDAGTPGSREM
DSVAFEDVAVNFTLEEWALLDPSQKNLYRDVMRETFRNLASVGKQWEDQNIEDPFKIP
RRNISHIPERLCESKEGGQGEETFSQIPDGILNKKTPGVKPCESSVCGEVGMGPSSLN
RHIRDHTGREPNEYQEYGKKSYTRNQCGRALSYHRSFPVRERTHPGGKPYDCKECGET
FISLVSIRRHMLTHRGGVPYKCKVCGKAFDYPSLFRIHERSHTGEKPYECKQCGKAFS
CSSYIRIHERTHTGDKPYECKQCGKAFSCSKYIRIHERTHTGEKPYECKQCGKAFRCA
SSVRSHERTHTGEKLFECKECGKALTCLASVRRHMIKHTGNGPYKCKVCGKAFDFPSS
FRIHERTHTGEKPYDCKQCGKAFSCSSSFRKHERIHTGEKPYKCTKCGKAFSRSSYFR
IHERTHTGEKPYECKQCGKAFSRSTYFRVHEKIHTGEKPYENPNPNASVVPVLS"
BASE COUNT 827 a 553 c 618 g 775 t
ORIGIN
1 cccacccggg ctcgcgtctc cgtttctccg agaggcccaa ggtgtctccg ccgcagcctc
61 tgtcgcgccg tgacctgtac aggtcgcggg agtcgtaggg aggacgccgg gacacctgga
121 agccgagaaa tggattcagt ggcctttgag gatgtggctg tgaacttcac cctggaggag
181 tgggctttgc tggatccttc ccagaagaat ctctacaggg atgtgatgcg ggaaaccttc
241 aggaacctgg cttctgtagg aaaacaatgg gaagaccaga acattgaaga cccattcaaa
301 attcccagga gaaatataag tcatattcca gagagactct gtgaaagtaa agaaggtggt
361 caaggtgaag aaaccttcag ccagattcca gatggtattc tgaacaagaa aactcctgga
421 gtaaaaccgt gtgaaagcag tgtgtgtgga gaagttggca tgggtccttc atcacttaat
481 aggcacatca gagatcacac tggacgtgaa ccaaatgaat atcaggaata tggaaagaag
541 tcatatacac gtaaccagtg tggacgagcc ttgagttatc atcgctcttt tccagtacgt
601 gaaaggactc atcctggagg aaagccctat gattgtaagg aatgtggaga aacctttatt
661 tctcttgtaa gcattcgaag acacatgtta acgcataggg gaggtgtacc ttacaaatgt
721 aaggtgtgtg ggaaagcctt tgattatccc agtttatttc gtatacatga aagaagtcac
781 actggagaga aaccttatga atgcaagcaa tgtgggaaag ccttcagttg ttccagttac
841 attagaatac atgaaaggac tcacactgga gataaaccct atgaatgcaa gcagtgtggg
901 aaagctttca gttgttccaa gtacattcga atccatgaac gaactcacac aggagagaaa
961 ccctacgaat gtaaacagtg cggtaaagcc tttaggtgcg ccagttctgt tcgaagtcac
1021 gagaggactc acaccggaga gaaacttttt gaatgtaagg aatgcgggaa ggctttgact
1081 tgtcttgcaa gtgttagaag acacatgata aagcacactg gcaatggacc ttataaatgt
1141 aaggtgtgtg ggaaagcctt tgatttcccc agttcatttc gaatccatga aaggacccac
1201 actggagaga aaccctatga ttgtaagcaa tgtgggaaag ccttcagttg ttccagttcg
1261 tttcgaaaac atgaaagaat tcacactgga gagaaaccct ataaatgtac aaaatgtggg
1321 aaagccttca gtcgttccag ttacttccga atccatgaaa gaactcacac tggagagaaa
1381 ccctatgaat gtaagcaatg tgggaaagcc ttcagtcgat ccacttactt tcgagtacat
1441 gaaaaaattc atactggaga gaaaccctat gagaacccta accctaacgc ttcagttgtc
1501 ccagttcttt catgagcata aaaggagtca catagagaaa ccccatgaaa gtaagaaatt
1561 tgggaaagcc ttcagtcctt tctgtttctt tcaactacgt gaaaggattc acagtggaga
1621 aagaccctgt aagataattg gctttaaatt acgagagact tgtgatagga cagtaaaacc
1681 tagagttgga gttggatctc tggattgtgt tatgtcagtg ttggtaggtt aggaactaga
1741 tttcccagaa tccattccat ttgtgattcc atgatacaat tcaccagtaa cctatcttac
1801 atgagattcg gaagtaagtt aagaaggcat tagtcatggt ttggaagcac catacaggga
1861 gacagctgtg tgaatacagg ctgtatggac acttgcttcc atcccatttt cctgcttctt
1921 tgggttgcca atcaagagta tcctcaaaac gacttgactt taattttctc ggaggtgata
1981 ggcttccaca caggtctcca gaagccctgc attgaatatc catccacact ttggttttcc
2041 ttcagacatt attatgtctg tactaggcaa ctaattcaga ctgtcctggt tgggaatatt
2101 ctgtgatgct ctgactcccc tagtctgtag acggaattgg catacggtct aatttgtgta
2161 gtaagcacct ttgttcatac tagtagtgac tgtattcttg attcagcctg atagctacca
2221 tgctgctgtc aaaaccaacc agaggggagc ttgttcttct gctgtagtgt gcagtgactg
2281 gcctcaccca ggactttgat gtgagaatga gcactttcct ctatcaggaa atttcaagtg
2341 tttcctgtta ttcgtagctc aatgtaatgc ctcagttcat tttcagttgt ttgattatat
2401 gtgactaata tgtatttttt attcaaacaa gacttctgta catgtttctt caaaacagtt
2461 tattaactgt cttcagtctt ggattacatc aagtttataa ttttggcaaa ttgttaagac
2521 actgtgaagt cagcgttaac catgtgcata caacttaagg aattttttcc tcctcatgta
2581 aattttactt ttcatgctta tatagtttca acttttatct tcatagtaat ttctcatcta
2641 ctcataatac caaaagttaa gtcatgctgt tttgtgtgct ctcttgctaa agaccgcaga
2701 gaccatacct gttgtcaaag agggtgtaat aaactgtaat aataatcatg accacaaaaa
2761 aaaaaaaaaa aaa
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