LOCUS BC006278 3077 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CTF18, chromosome transmission fidelity factor 18
homolog (S. cerevisiae), mRNA (cDNA clone MGC:10737 IMAGE:3959495),
complete cds.
ACCESSION BC006278
VERSION BC006278.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3077)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3077)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC006278.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27501457.
FEATURES Location/Qualifiers
source 1..3077
/db_xref="H-InvDB:HIT000086630"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10737 IMAGE:3959495"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3077
/gene="CHTF18"
/gene_synonym="C321D2.2"
/gene_synonym="C321D2.3"
/gene_synonym="C321D2.4"
/gene_synonym="CHL12"
/gene_synonym="Ctf18"
/gene_synonym="RUVBL"
/db_xref="GeneID:63922"
/db_xref="HGNC:HGNC:18435"
CDS 31..2958
/gene="CHTF18"
/gene_synonym="C321D2.2"
/gene_synonym="C321D2.3"
/gene_synonym="C321D2.4"
/gene_synonym="CHL12"
/gene_synonym="Ctf18"
/gene_synonym="RUVBL"
/codon_start=1
/product="CTF18, chromosome transmission fidelity factor
18 homolog (S. cerevisiae)"
/protein_id="AAH06278.2"
/db_xref="GeneID:63922"
/db_xref="HGNC:HGNC:18435"
/translation="MEDYEQELCGVEDDFHNQFAAELEVLAELEGASTPSPSGVPLFT
AGRPPRTFEEALARGDAASSPAPAASVGSSQGGARKRPVDADLQPAGSLPHAPRIKRP
RLQVVKRLNFRSEEMEEPPPPDSSPTDITPPPSPEDLAELWGHGVSEAAADVGLTRAS
PAARNPVLRRPPILEDYVHVTSTEGVRAYLVLRADPMAPGVQGSLLHVPWRGGGQLDL
LGVSLASLKKQVDGERRERLLQEAQRLSDTLHSLRSGEEEAAQPLGAPEEEPTDGQDA
SSHCLWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSRKPRPSVEPARV
SKEATAPGKWKSHEQVLEEMLEAGLDPSQRPKQKVALLCGPPGLGKTTLAHVIARHAG
YSVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEIDGAPVAAINVLLS
ILNRKGPQEVGPQGPAVPSGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKQQAFLL
HFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDNDIRACINTLQFLYSRGQRE
LSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQDPALPADTLLLGDGDAGS
LTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLGAVCVALDWLAFDDLL
AGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQNRMSQMRNLIQTL
VSGIAPATRSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTREKQQLASLVGTMLA
YSLTYRQERTPDGQYIYRLEPNVEELCRFPELPARKPLTYQTKQLIAREIEVEKMRRA
EASARVENSPQVDGSPPGLEGLLGGIGEKGVHRPAPRNHEQRLEHIMRRAAREEQPEK
DFFGRVVVRSTAVLSAGDTAPEQDSVERRMGTAVGRSEVWFRFNEGVSNAVRRSLYIR
DLL"
BASE COUNT 553 a 1000 c 1038 g 486 t
ORIGIN
1 tcggagcggg agctcgggct cgcggacggt atggaggact acgagcagga gctgtgcggc
61 gtcgaggatg atttccacaa ccagttcgcg gccgagctgg aggtgctggc agagctggaa
121 ggggcgtcga ctccgtcgcc ctccggggtc cccctgttca ccgcgggccg acccccgcgg
181 acgttcgagg aggcccttgc cagaggggac gcggcctcca gtcccgcccc agccgcatct
241 gtgggcagca gccagggcgg cgccaggaag aggccggtgg acgccgacct gcagccggcc
301 gggtccctgc cccacgcccc caggatcaaa cggcctaggc tgcaggtggt caagaggctg
361 aacttcaggt cggaggagat ggaggagccg ccccctcccg actcctcgcc gacggacatc
421 accccgccgc cgagccctga ggacctcgca gagctttggg gccacggagt ctcagaagct
481 gctgccgacg tgggtctcac acgggcctca ccagctgccc gcaatcccgt cctgaggcgg
541 ccccccatct tggaggacta cgtccacgtg acatccacgg agggcgtccg ggcttatctg
601 gtgctgcgtg ctgaccccat ggccccgggg gtgcagggct ctctcctcca cgtcccatgg
661 cgaggcggtg gccagctgga cctgctgggt gtgtccttag cctccctgaa gaagcaggtc
721 gacggcgagc ggcgggagcg gctgcttcag gaggcccaga ggctttcaga caccctgcac
781 agtctcaggt cgggggagga ggaggcagcc cagcccttgg gggcccctga ggaggagccg
841 actgacggtc aagacgcctc cagtcactgc ctctgggtgg atgagtttgc accgcgccac
901 tacacggagc tgctcagtga tgacttcacc aaccgctgcc tgctcaagtg gctgaagttg
961 tgggacctgg tggtgtttgg ccacgagagg ccttcccgga agcccaggcc cagtgttgag
1021 ccggcccggg tcagcaagga ggccacagcc ccaggcaagt ggaagagcca cgaacaggtg
1081 ctggaggaga tgctggaggc tgggctggac ccgagccagc gaccgaagca gaaggtggca
1141 ctgctctgtg ggcccccggg gctggggaag accaccctgg cacacgtgat tgcgcgtcac
1201 gcggggtact ctgtggtgga gatgaacgcc agtgacgacc gtagcccgga ggtcttccgc
1261 acacgcatcg aggcggccac ccagatggag tcggtgctgg gtgctggcgg gaagcccaac
1321 tgcctggtca tcgatgagat cgacggggcc cccgtggccg ccatcaatgt cctcctgagc
1381 atcctgaacc gcaaggggcc acaggaggtg gggccacagg gcccggctgt gccttcggga
1441 ggcggccgac ggcgccgggc agaggggggg ctcctcatga ggcccattat ctgcatttgc
1501 aatgaccagt tcgcaccgtc cctgcggcag ctgaagcagc aggccttcct gctccacttc
1561 ccgccgactc tgccctcgag gctggtgcag cggctccagg aggtctccct gcggcagggc
1621 atgagggccg acccaggggt gctggccgcc ctctgtgaga aaactgacaa tgacatccgg
1681 gcctgcatca acaccctgca gttcctgtac agccggggcc agcgggagct gagcgtgcgg
1741 gacgtgcagg ccacacgcgt gggcctcaag gaccagcgca gagggctctt ctcggtgtgg
1801 caggaggtct tccagctgcc tcgagcccag aggcgccgtg tgggccagga ccccgccctg
1861 cctgctgaca cactcctgct gggtgacggg gacgcgggct ccctcacctc cgcctcacag
1921 cgattctacc gtgtcctgca tgccgctgcc tctgcgggcg agcacgagaa ggtggtccag
1981 ggcttgtttg acaacttcct gcgtctgcgg ctgcgagact ccagcctggg tgctgtgtgt
2041 gtggccctcg actggctggc cttcgatgac ctgctggcgg gggctgctca tcacagtcag
2101 agcttccagc tgctgcgcta cccacccttc ctgcccgtgg ccttccatgt gctgtttgct
2161 tccagccaca cacccaggat caccttcccc agcagccagc aggaggccca gaaccggatg
2221 agccagatga ggaacctgat ccagacgctg gtgtccggca tcgcgccagc cacgcgcagc
2281 cgggccacgc cccaggccct gctcctcgat gccctctgcc tgctcctgga cattcttgca
2341 cccaagctcc gccccgtgag cacacagctg tacagcaccc gtgaaaagca acagctggcc
2401 agcctggtgg gcacgatgct cgcttacagc ctgacctacc gccaggagcg cacgcccgat
2461 ggccagtaca tctacaggct ggagccgaac gtggaggaac tctgccgctt ccctgagctg
2521 cctgcccgca agcccctcac ctaccagacg aagcagctca tcgcccgcga gatcgaggtg
2581 gagaagatgc ggcgggcgga ggcttctgcc cgggtagaga acagccccca ggtggatggg
2641 agccccccag ggctcgaggg tctgctgggg ggcattgggg agaaaggggt gcaccgacct
2701 gccccacgca accatgagca gcggctggag cacatcatga ggcgagcggc ccgggaggaa
2761 cagcctgaga aggacttctt tggacgtgtg gtcgtcagga gcacagcagt cctgagtgca
2821 ggggacacgg ccccggagca ggactcagtg gagcggcgca tgggcacagc ggtgggcagg
2881 agcgaggtct ggttccgctt caacgagggt gtctccaacg ccgtgcggcg cagcctgtac
2941 atcagggact tgctctagtt ctctgagccg cggacatgcc ctcgcattgc ttcccgcaga
3001 gtgcagagac aggaagctgg agatgtcttt ataaagtcac acctttacag actgtaaaaa
3061 aaaaaaaaaa aaaaaaa
//