LOCUS BC006277 1133 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast), mRNA (cDNA clone MGC:10638 IMAGE:3957107), complete cds. ACCESSION BC006277 VERSION BC006277.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1133) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1133) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC006277.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 15 Row: b Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4507782. FEATURES Location/Qualifiers source 1..1133 /db_xref="H-InvDB:HIT000032720" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10638 IMAGE:3957107" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1133 /gene="UBE2H" /gene_synonym="E2-20K" /gene_synonym="UBC8" /gene_synonym="UBCH" /gene_synonym="UBCH2" /db_xref="GeneID:7328" /db_xref="MIM:601082" CDS 318..869 /gene="UBE2H" /gene_synonym="E2-20K" /gene_synonym="UBC8" /gene_synonym="UBCH" /gene_synonym="UBCH2" /codon_start=1 /product="UBE2H protein" /protein_id="AAH06277.1" /db_xref="GeneID:7328" /db_xref="MIM:601082" /translation="MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGT PYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLT NIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEALKEQEEG TGDSSSESSMSDFSEDEAQDMEL" misc_feature 381..719 /gene="UBE2H" /gene_synonym="E2-20K" /gene_synonym="UBC8" /gene_synonym="UBCH" /gene_synonym="UBCH2" /note="UBCc; Region: Ubiquitin-conjugating enzyme E2, catalytic domain homologues" /db_xref="CDD:smart00212" BASE COUNT 328 a 265 c 302 g 238 t ORIGIN 1 gagcaggcga gcgagccaca gcaggcagga gggagcgtcg cgcggcgcag aggagcgccg 61 gggcagggcc gcggcggaac cacagccgga gaggggcagc ccgagccggg cgccgcaggg 121 tccccacccc cacccggccg gacagtgccc ggtgttcccc cgtgcggggg gcggcggcgg 181 cggctgacgg gaccgtcggg accgcggggg tgttgccacc tccaccgagg agccggcgcg 241 gccgcgggct cctcagagcc ggggccccgg gcccgtgaca gacgggccga gaaagggaga 301 gaggcggcgg cgacaccatg tcatctccca gtccgggcaa gaggcggatg gacacggacg 361 tggtcaagct catcgagagt aaacatgagg ttacgatcct gggaggactt aatgaatttg 421 tagtgaagtt ttatggacca caaggaacac catatgaagg cggagtatgg aaagttagag 481 tggacctacc tgataaatac cctttcaaat ctccatctat aggattcatg aataaaattt 541 tccatcccaa cattgatgaa gcgtcaggaa ctgtgtgtct agatgtaatt aatcaaactt 601 ggacagctct ctatgatctt accaatatat ttgagtcctt cctgcctcag ttattggcct 661 atcctaaccc catagatcct ctcaatggtg acgctgcagc catgtacctc caccgaccag 721 aagaatacaa gcagaaaatt aaagagtaca tccagaaata cgccacggag gaggcgctga 781 aagaacagga agagggtacc ggggacagct catcggagag ctctatgtct gacttttccg 841 aagatgaggc ccaggatatg gagttgtagt agaaaaagca cctgcttttc agaaagacta 901 ttatttccta accatgagaa gcagactata atattcatat ttaaacaaag caattttttt 961 tattactaaa caaggttttt atgaataata gcattgatat atatatatta tatatcaccc 1021 tttagatctt gatttcttgg tcatttctca acctgaggtg catataatga aaactgtaaa 1081 cttttttaaa taaacgtgta tataccttga aaaaaaaaaa aaaaaaaaaa aaa //