LOCUS BC006252 1154 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens solute carrier family 6 (neurotransmitter transporter,
taurine), member 6, mRNA (cDNA clone IMAGE:3948607), complete cds.
ACCESSION BC006252
VERSION BC006252.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1154)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1154)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006252.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: h Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507044
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1154
/db_xref="H-InvDB:HIT000032706"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3948607"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1154
/gene="SLC6A6"
/gene_synonym="TAUT"
/db_xref="GeneID:6533"
/db_xref="MIM:186854"
CDS 256..858
/gene="SLC6A6"
/gene_synonym="TAUT"
/codon_start=1
/product="SLC6A6 protein"
/protein_id="AAH06252.1"
/db_xref="GeneID:6533"
/db_xref="MIM:186854"
/translation="MATKEKLQCLKDFHKDILKPSPGKSPGTRPEDEAEGKPPQREKW
SSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGSGLPVFFLEIIIG
QYTSEGGITCWEKICPLFSGIGYASVVIVSLLNVYYIVILAWATYYLFQSFQKELPWA
HCNHSWNTPHCMEDTMRKNKSVWITISSTNFTSPVIEFWE"
BASE COUNT 279 a 328 c 316 g 231 t
ORIGIN
1 agaagccgct tataaattac cgcttccttc gcgccgccgc caacgccgag ccccgaggac
61 cgcaagccca gaggacaagc tgcgccaaga gggagtgcgg agcgttcacc cagcgggtca
121 gagagcgagc gggcaggcag cccccggccg gcggaacccg gcacagccga gcagagcgcg
181 ggcggcgccg cagccacccc agatccagaa ccagaaccac agcccttctg aggagctccc
241 aaacaaagca aggagatggc caccaaggag aagctgcagt gtctgaaaga tttccacaag
301 gacatcctga agccctcacc agggaagagc ccaggcacgc ggcctgagga cgaggctgag
361 ggaaaacctc cgcagaggga gaagtggtct agcaagatcg actttgtgct ctctgtggct
421 ggcggcttcg tgggcttggg caacgtctgg cgcttcccgt acctctgcta caagaatggt
481 ggaggtgcgt ttctcatacc gtattttatt ttcctgtttg ggagcggcct gcctgtgttt
541 ttcttggaga tcatcatagg ccagtacacc tctgaagggg gcatcacctg ctgggaaaag
601 atctgcccct tgttctctgg tatcggctat gcctccgttg taattgtgtc cctcctgaat
661 gtctactaca tcgtcatcct ggcctgggcc acatactacc tgttccagtc cttccagaag
721 gagctgccct gggcacactg caaccacagc tggaacacac ctcactgcat ggaggacacc
781 atgcgcaaga acaagagtgt ctggatcacc atcagctcca ccaacttcac ctcccctgtc
841 atcgagttct gggagtaagg ccacctcatt gaagcaagga ggaggacatg ggtggggcag
901 agaggatggc ccacttcctt atctcctccc ctgggataca ggagccactg tcttcggggg
961 agtgggagga gggtgcagat ctggagataa atttatgcct ttggccatag acaggactgg
1021 aatcccagtt ctgccactta ctggctgttt gaccttaggc aagccactcc tcctttctga
1081 gcctcagttt ctttacctgt aagataaaaa gaatgaatca ttactaccct gtgaaaaaaa
1141 aaaaaaaaaa aaaa
//