LOCUS BC006237 1197 bp mRNA linear HUM 05-NOV-2003
DEFINITION Homo sapiens HECT domain containing 1, mRNA (cDNA clone
IMAGE:3952406), partial cds.
ACCESSION BC006237
VERSION BC006237.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1197)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1197)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006237.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: b Column: 23.
FEATURES Location/Qualifiers
source 1..1197
/db_xref="H-InvDB:HIT000032694"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3952406"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1197
/gene="HECTD1"
/gene_synonym="KIAA1131"
/db_xref="GeneID:25831"
CDS <1..367
/gene="HECTD1"
/gene_synonym="KIAA1131"
/codon_start=2
/product="HECTD1 protein"
/protein_id="AAH06237.2"
/db_xref="GeneID:25831"
/translation="SGNQGCHVYNLRFVTCITSGNQGCHVYNPGFLRFVRVLCGMSSD
ERKAFLQFTTGCSTLPPGGLANLHPRLTVVRKVDATDASYPSVNTCVHYLKLPEYSSE
EIMRERLLAATMEKGFHLN"
misc_feature 83..358
/gene="HECTD1"
/gene_synonym="KIAA1131"
/note="HECTc; Region: HECT domain"
/db_xref="CDD:cd00078"
BASE COUNT 346 a 229 c 235 g 387 t
ORIGIN
1 ctcaggaaac cagggctgtc acgtgtataa cctcaggttt gtcacgtgta taacctcagg
61 aaaccagggc tgtcacgtgt ataacccagg tttcctgagg tttgtgaggg ttttatgtgg
121 catgtcttct gatgaaagga aagcattctt gcagtttacc actggttgtt caactctacc
181 cccaggtgga ctggctaacc tgcatcccag gctcacggtt gtacgcaagg ttgatgctac
241 tgatgcaagc tatccatcag tcaatacatg tgtgcattac cttaagttgc ctgaatattc
301 ttccgaggag atcatgagag agcgcctgct agctgctaca atggagaaag gctttcatct
361 caattgagct ttgaagtgca atgggagaca tcagagactt taaaaatact agtgaagcct
421 cttgtgtttg tgtgcagaga agtatatgat ccaccatgct aatgacactt gccttttttt
481 ccaccattaa ggctttaaga acatgtggaa taagtttttt agctgctaat gacaaaacaa
541 atcctgtaac tacccagcca gcaagtatat agcacagaac actgtgttac tttacaaggg
601 cttatgtgac tggaataagg tggtcccact tgactgttcc aaagagcagc ttctcagatc
661 ttcagtgttc actggtaaat ttctaacagt gtatttgtgt aaagtttgtc atttcatact
721 ccatacacta cagttgctgt cactgatccc tgttttgctg gcttttaagc tacttggtca
781 aaaatcctgc ttccttaaaa catagagaat taatgagcat ctcaagcttt ttcttttcct
841 ttttaatgat gcctgcacta tcaagagtat tctagtgttc tctctttgtt tggcatataa
901 tcatgcacca aactttttat ttctttaagg tgggagtata tttttatttc ctaaatgcca
961 tactatgaag atcaaagtct taagtgtgtt tgcagctcaa aaataaagat gtattaaggg
1021 gggaaaacct ggtctaagtg caaggcacac ttacagcgag ttttactttc ggttgtattt
1081 tctttgtata ttataaacat ttatttaact tgttgccgtt tgaagtaaaa aatttccaaa
1141 atgtatgctc aacaataatc attaaaatgt ttgcagcgta aaaaaaaaaa aaaaaaa
//