LOCUS BC006206 3714 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens trafficking protein particle complex 9, mRNA (cDNA
clone MGC:4769 IMAGE:3538806), complete cds.
ACCESSION BC006206
VERSION BC006206.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3714)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3714)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC006206.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: c Column: 18.
FEATURES Location/Qualifiers
source 1..3714
/db_xref="H-InvDB:HIT000032668"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4769 IMAGE:3538806"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3714
/gene="NIBP"
/gene_synonym="IBP"
/gene_synonym="IKBKBBP"
/gene_synonym="T1"
/gene_synonym="TRS120"
/db_xref="GeneID:83696"
/db_xref="HGNC:HGNC:30832"
/db_xref="MIM:611966"
CDS 239..2977
/gene="NIBP"
/gene_synonym="IBP"
/gene_synonym="IKBKBBP"
/gene_synonym="T1"
/gene_synonym="TRS120"
/codon_start=1
/product="NIBP protein"
/protein_id="AAH06206.3"
/db_xref="GeneID:83696"
/db_xref="HGNC:HGNC:30832"
/db_xref="MIM:611966"
/translation="MSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGTGGKSGARRF
QGSTLPAEAANRHRPGALTTNGINPDTSTEIGRAKNCLSPEDIIDKYKEAISYYSKYK
NAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLRQLSEEEKIQRYSILSELYE
LIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLSLDPKDFSRGTHR
GWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKDVAQSLENYTS
KCPGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLGQNVSTKSP
FIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLTSGVEFE
SLPAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIKTSGS
TVEVIPALPRLQISTSLPRSAHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIGME
PLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQE
NLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNF
KYSGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDVFNSTEHEL
TVSTRSSEALILHAGECQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEERREARGL
EIHSKLGICWRIPSLKRSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPCDREAVAA
CQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSSTFYLD
AVQPSGQSACLGALLFLYTGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQA"
BASE COUNT 827 a 1099 c 1003 g 785 t
ORIGIN
1 cgaggacttc atcgagtcac tgttcatcgt gctggagtcc aagcgtctgg acagagccac
61 agacaagtct ggggataaga tcccccttct ctgtgtcccg tttgagaaaa aggactttgt
121 aggactggac acagacagca gacattacaa gaagcggtgc caaggccgca tgcggaagca
181 cgtgggggac ctgtgcctgc aggcagggat gctgcaggac tccctggtgc attaccacat
241 gtcggtggag ctgctgcgtt ctgtgaatga ctttctgtgg cttggagctg ccctggaagg
301 attgtgttca gcttctgtca tctatcacta tcctggtgga actggtggga agagtggagc
361 tcggaggttc cagggcagca cccttcctgc tgaagcagcc aatagacacc ggccaggtgc
421 cctcaccacc aatggcatca accctgacac cagtactgag atcggacgtg ctaagaactg
481 ccttagccct gaagacataa ttgacaagta taaagaggcg atttcctatt acagcaagta
541 taagaatgcg ggagtgattg agttggaagc gtgcatcaag gctgtacgtg tccttgcaat
601 tcagaaacgg agcatggaag catcagaatt tcttcagaat gcagtttaca ttaaccttcg
661 acagctttct gaggaagaga aaattcagcg ctacagcatc ctctccgagc tctatgagct
721 gatcggcttc catcgcaagt ctgcgttctt caagcgcgtg gccgccatgc agtgcgtggc
781 cccaagcatc gcggagcctg ggtggagggc ctgctacaaa ctcctcctgg aaacgctgcc
841 cggctacagt ctgtcgctgg atcccaaaga tttcagcaga ggcacgcaca gaggctgggc
901 tgcggtccag atgcgtttgc tccatgaatt ggtctacgcc tcccgaagga tggggaaccc
961 tgccctctct gtcagacacc tgtccttcct tctacagacc atgctggact tcttgtcgga
1021 tcaggaaaag aaagatgtgg cccaaagcct agagaactat acgtccaagt gtcctgggac
1081 catggagccc atcgccctcc ctggcggcct caccctgcca ccggtgccct tcaccaagct
1141 tcccatcgtc aggcatgtga aactattgaa ccttcctgct agcctccggc cacacaaaat
1201 gaaaagcttg ctgggtcaga acgtgtcaac caaaagtcct ttcatctatt caccaattat
1261 cgcacacaac cgtggagaag agcggaacaa gaaaatagat ttccagtggg ttcaaggaga
1321 tgtgtgtgaa gttcagctga tggtatataa cccaatgccg tttgaacttc gagttgaaaa
1381 catggggctg ctcaccagcg gagtggagtt cgagtctctc cctgcggcgc tttctcttcc
1441 ggctgaatct ggtctgtacc cagtgacgct cgtcggggtc ccgcagacga ctggaacgat
1501 tactgtgaac ggttaccata ccacggtctt cggtgtgttc agtgactgtt tgctggataa
1561 cctgccggga ataaaaacca gtggctccac agtggaagtc attcccgcgt tgccaagact
1621 gcagatcagc acctctctgc ccagatctgc acattcattg caaccttctt ctggtgatga
1681 aatatctact aatgtatctg tccagcttta caatggagaa agtcagcaac taatcattaa
1741 attggaaaat attggaatgg aaccattgga gaaactggag gtcacctcga aagttctcac
1801 cactaaagaa aaattgtatg gcgacttctt gagctggaag ctagaggaaa cccttgccca
1861 gttccctttg cagcctggga aggtggccac gttcacaatc aacatcaaag tgaagctgga
1921 tttctcctgc caggagaatc tcctgcagga tctcagtgat gatggaatca gtgtgagtgg
1981 ctttcccctg tccagtcctt ttcggcaggt cgttcggccc cgagtggagg gcaaacctgt
2041 gaacccaccc gagagcaaca aagcaggcga ctacagccac gtgaagaccc tggaagctgt
2101 cctgaatttc aaatactctg gaggcccggg ccacactgaa ggatattaca ggaatctctc
2161 cctggggctg catgtagaag tcgagccgtc tgtatttttc acccgagtca gcaccctccc
2221 agcaaccagt acccggcagt gtcacctgct cctggatgtc ttcaactcca ccgagcatga
2281 gctgaccgtc agcaccagga gcagcgaggc actcatcctg cacgccggcg agtgccagcg
2341 aatggctatt caagtggaca agttcaactt tgagagtttc ccggagtccc ctggggagaa
2401 ggggcaattt gcaaacccca agcagctgga ggaagagcgg cgggaagccc gaggcctgga
2461 gatccacagc aagctgggca tctgctggag aatcccctcc ctgaagcgca gtggcgaggc
2521 gagtgtggaa ggactcctga accagctcgt cctggagcac ctgcagctgg cgcctctgca
2581 gtgggatgtg ctggtggacg gacagccatg tgaccgcgag gctgtggcgg cctgccaggt
2641 gggcgacccc gtgcgcctgg aggtgcggct gaccaaccgg agcccgcgca gcgtagggcc
2701 cttcgccctc actgtggtcc ccttccagga ccaccagaac ggcgtgcaca actacgacct
2761 gcacgacacc gtctccttcg tgggctccag caccttctac ctcgacgcgg tgcagccgtc
2821 cggccagtcg gcctgcctcg gggccctcct cttcctctac acgggagact tcttcctcca
2881 catccggttc cacgaggaca gcaccagcaa ggagctgcca ccctcttggt tctgcctgcc
2941 cagtgtgcac gtgtgtgccc tggaggcgca ggcctgagcc cgcctacttc cgtccctctt
3001 tctgcagggc cagaggtgac cctgcctggc ctcccacacc ccctgcaatg agcaaggcct
3061 tcactgcagc cccatctcct cctcctcccc cagacccctc ccagccctct cctcctgttc
3121 ctcctgtagc atctttgctg ggctacgcag aagccccgga catggcagcc ccaccccatg
3181 ccacgcccct tcctacactg ttccctggac catacacagg ctgaagcaga ggaaatccca
3241 aagcgggtgc ccatccagcc caggtcccag gatccctgca cccatttctg tgacctgggg
3301 ccccagccgt gctgtgctgc tcatcccagc agagggacct ccctcgtcca gcgacttccc
3361 tttggccata gaaagaaatg gtgagcatga gactgggcac agcctgaggg cgtgggcagc
3421 ttcccaccct ccctgggcct tggaatcccc caaggctggt tttcttcctg gagaccccca
3481 tgggcaactt ggcaggagag atggtgccgt aggaggtcgt ggatggttga tgccaagaga
3541 ggccctccac ccgtggtggg caaatgtcca ggcctgggct ggcagcccag ggctgtttct
3601 gggtgctccc tggccccagg gtggcgtctg gttaccatgg ctgtgtgtgt ccatgtctgc
3661 aagcagttct tcaataaatg gcctgcctcc cccaaaaaaa aaaaaaaaaa aaaa
//