LOCUS BC006178 1393 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SEC22 vesicle trafficking protein homolog C (S. cerevisiae), mRNA (cDNA clone MGC:13261 IMAGE:4054516), complete cds. ACCESSION BC006178 VERSION BC006178.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1393) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1393) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: p Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21536310. FEATURES Location/Qualifiers source 1..1393 /db_xref="H-InvDB:HIT000032651" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13261 IMAGE:4054516" /tissue_type="Primary B-Cells from Tonsils" /clone_lib="NIH_MGC_48" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1393 /gene="SEC22C" /gene_synonym="MGC13261" /gene_synonym="MGC5373" /db_xref="GeneID:9117" /db_xref="HGNC:HGNC:16828" /db_xref="MIM:604028" CDS 116..1027 /gene="SEC22C" /gene_synonym="MGC13261" /gene_synonym="MGC5373" /codon_start=1 /product="SEC22 vesicle trafficking protein homolog C (S. cerevisiae)" /protein_id="AAH06178.1" /db_xref="GeneID:9117" /db_xref="HGNC:HGNC:16828" /db_xref="MIM:604028" /translation="MSVIFFACVVRVRDGLPLSASTDFYHTQDFLEWRRRLKSLALRL AQYPGRGSAEGCDFSIHFSSFGDVACMAICSCQCPAAMAFCFLETLWWEFTASYDTTC IGLASRPYAFLEFDSIIQKVKWHFNYVSSSQMECSLEKIQEELKLQPPAVLTLEDTDV ANGVMNGHTPMHLEPAPNFRMEPVTALGILSLILNIMCAALNLIRGVHLAEHSLQVAH EEIGNILAFLVPFVACIFQCYLYLFYSPARTMKVVLMLLFICLGNMYLHGLRNLWQIL FHIGVAFLSSYQILTRQLQEKQSDCGV" BASE COUNT 323 a 326 c 344 g 400 t ORIGIN 1 ggccgagccc tcccggtcgg ctaagattgc tgaggaggcg gcgggtagct ggcaggcgcc 61 gacttccgaa ggccgccgtc cgggcgaggt gtcctcatga cttctcttgt ggaccatgtc 121 cgtgatcttt tttgcctgcg tggtacgggt aagggatgga ctgcccctct cagcctctac 181 tgatttttac cacacccaag attttttgga atggaggaga cggctcaaga gtttagcctt 241 gcgactggcc cagtatccag gtcgaggttc tgcagaaggt tgtgacttta gtatacattt 301 ttcttctttc ggggacgtgg cctgcatggc tatctgctcc tgccagtgtc cagcagccat 361 ggccttctgc ttcctggaga ccctgtggtg ggaattcaca gcttcctatg acactacctg 421 cattggccta gcctccaggc catacgcttt tcttgagttt gacagcatca ttcagaaagt 481 gaagtggcat tttaactatg taagttcctc tcagatggag tgcagcttgg aaaaaattca 541 ggaggagctc aagttgcagc ctccagcggt tctcactctg gaggacacag atgtggcaaa 601 tggggtgatg aatggtcaca caccgatgca cttggagcct gctcctaatt tccgaatgga 661 accagtgaca gccctgggta tcctctccct cattctcaac atcatgtgtg ctgccctgaa 721 tctcattcga ggagttcacc ttgcagaaca ttctttacag gttgcccatg aggaaattgg 781 aaacattctg gcttttcttg ttcctttcgt agcctgcatt ttccagtgtt atttgtacct 841 gttctacagt ccagccagga ctatgaaggt ggtgcttatg ctgctcttta tttgcctggg 901 caacatgtac ctgcacgggc tgaggaacct ctggcaaatc cttttccaca taggagtggc 961 ttttctgtct tcatatcaga tactaacaag gcagcttcag gagaagcagt ctgactgtgg 1021 agtatgagga tgacactgtg atgaatggat tctttgattt tcttttgagg atcaatctat 1081 gtttctcttt ctgcttctct actttacact ccagtttcca tccttttcag ccaactggac 1141 tgaaaaacca ggaattgggg atgttaaaca gttgcagtgg aagtcatgag gttgcttgat 1201 acccagcctt ggttctgtgc caagcattac tgcaggatct ccagccagtt cagcacgttt 1261 acctaggaca gctggatctg ggggctcatc cagaaagagc tttattggaa gagagaaagg 1321 aaatattttg gtcttttaag ttgaatgata cagtaaacca cttgattcaa taacaaaaaa 1381 aaaaaaaaaa aaa //