LOCUS BC006174 1660 bp mRNA linear HUM 24-JUN-2004
DEFINITION Homo sapiens F-box protein 42, mRNA (cDNA clone IMAGE:4053618),
partial cds.
ACCESSION BC006174
VERSION BC006174.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1660)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1660)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: p Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1660
/db_xref="H-InvDB:HIT000086611"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4053618"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1660
/gene="FBXO42"
/gene_synonym="KIAA1332"
/db_xref="GeneID:54455"
CDS <1..1542
/gene="FBXO42"
/gene_synonym="KIAA1332"
/codon_start=1
/product="FBXO42 protein"
/protein_id="AAH06174.1"
/db_xref="GeneID:54455"
/translation="RFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIDDKMIVFG
GSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDATILILGGCGGPN
ALFKDAWLLHMHSGPWAWQPLKVENEEHGAPELWCHPACRVGQCVVVFSQAPSGRAPL
SPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSG
SREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISPSTPSAAEGYDLKIGL
SLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNGVH
TPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSSPGSPGSQSLSSG
ETVPIPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDT
KEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYF
VRAKR"
BASE COUNT 415 a 441 c 417 g 387 t
ORIGIN
1 agattctttg atgaaataca cacttactca ccctctaaaa attggtggaa ctgcattgtg
61 acaacccatg ggccacctcc catggctggc cactcctcct gtgtgataga tgataaaatg
121 attgtctttg gtggctcttt aggatcccgg caaatgagca atgatgtctg ggtccttgac
181 cttgagcagt gggcgtggtc caagccgaac atctctggcc ccagtcctca tcctcgaggt
241 ggccaatctc agattgtcat agatgatgca actatcttaa tcctcggagg gtgtggcggt
301 cccaatgctc tattcaagga tgcttggttg ttgcacatgc attctggtcc ttgggcctgg
361 cagccactca aggtagaaaa tgaagagcat ggggccccag aactgtggtg ccatccagct
421 tgccgggtgg gacagtgtgt ggtggtcttc agccaggctc ctagtgggag agccccactc
481 agccccagtt tgaactctcg cccatcacct atcagtgcca ctcctccagc tctcgttcct
541 gaaacccgag agtaccgctc tcagtctcca gtaagaagca tggatgaagc tccttgtgtt
601 aacggccgct ggggaacact gagacccagg gctcaaaggc agactccttc aggttcccgg
661 gaagggagcc tttccccagc cagaggagac ggctctccta tcctcaatgg tgggagtttg
721 tctccaggaa cggcagctgt gggtggctct tctttggaca gtcctgtaca ggccatatct
781 ccaagtactc catctgctgc tgaaggatac gacctgaaaa taggactttc tttggccccc
841 cgacgaggat cactaccaga tcagaaagat ctgagattag gatccataga tctgaattgg
901 gatctgaaac ccgcttccag tagtaatccc atggatggca tggacaatag gacagttggg
961 ggaagtatga gacaccctcc tgaacagaca aatggtgtgc ataccccacc tcacgtggcc
1021 agtgcccttg caggggccgt ctccccaggt gccctgcgtc ggagtctgga agccatcaaa
1081 gcgatgtcct ccaaaggccc ctcggcctct gcagcactaa gtcctcctct tgggtcttct
1141 ccaggctctc ctgggagcca gagtttgagc agtggagaaa cagtgcccat ccctcgccca
1201 gggcctgccc aaggagatgg acattcctta cctcccattg ctcgccgcct gggccaccac
1261 cctccacagt ccctaaatgt tggcaaaccc ctataccaga gtatgaactg caagcccatg
1321 cagatgtacg tgctggacat taaagacacc aaggagaagg ggcgggtcaa atggaaagta
1381 tttaatagca gttctgtggt tggacctcct gaaaccagcc tgcataccgt ggtacaaggc
1441 aggggtgaac tcatcatatt tggaggactc atggacaaga aacagaatgt gaagtactat
1501 ccaaaaacaa acgccttgta ctttgtacga gcaaagagat aatgtgttct aaaccccttt
1561 ccttttctgt ggcttttaat ttggaatttt ccagtgtgta agcatttgga ctgagaattg
1621 ggaaaacaaa attactccca gaaaaaaaaa aaaaaaaaaa
//