LOCUS BC006169 1880 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens SH3-domain binding protein 5 (BTK-associated), mRNA
(cDNA clone IMAGE:4025362).
ACCESSION BC006169
VERSION BC006169.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1880)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1880)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: n Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1880
/db_xref="H-InvDB:HIT000032644"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4025362"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 500 a 440 c 556 g 384 t
ORIGIN
1 gagaaagcct tgctatggat gtgacatttg ggctgagatg tggatgatga gaaggagtca
61 ggcagccgtg ccctggagga gatagcgatg cagacagcag aagccctgag gacagagcca
121 gctgacagcc catgtggtgc cagaggggag aactggagaa gttaaatcag tccacggatg
181 atatcaacag acgggagact gaacttgagg tccagtaggt gtttgcagat cccttcttaa
241 gcctcaactg tgtttcctcg gtttcccctg gctgcaggat gctcgtcaga agttccgctc
301 tgttctggtt gaagcaacgg tgaaactgga tgaactggtg aagaaaattg gcaaagctgt
361 ggaagactcc aagccctact gggaggcacg gagggtggcg aggcaggctc agctggaagc
421 tcagaaagcc acgcaggact tccagagggc cacagaggtg ctccgcgccg ccaaggagac
481 catctccctg gccgagcagc ggctgctgga ggatgacaag cggcagttcg actccgcctg
541 gcaggagatg ctgaatcacg ccactcagag ggtcatcgag gcggagcaga ccaagaccag
601 gagcgagctg gtgcataagg agacggcagc caggtacaat gccgccatgg gccgcatgcg
661 acagctggag aagaaactca agagagccat caacaagtcc aagccttatt ttgaactcaa
721 ggcaaagtac tatgtgcagc tcgagcaact gaaaaagact gtggatgacc tgcaggccaa
781 actgaccctg gcaaaaggcg agtacaagat ggccctgaag aacctggaga tgatctcaga
841 tgagatccac gagcggcggc gctccagtgc catggggcct cggggatgcg gtgttggtgc
901 tgagggcagc agcacatctg tggaggatct gccagggagc aaacctgagc ctgatgccat
961 ttctgtggcc tcggaggcct ttgaagatga cagctgtagc aactttgtgt ctgaagatga
1021 ctcggaaacc cagtccgtgt ccagctttag ttcaggacca acaagcccgt ctgagatgcc
1081 tgaccagttc cctgcggttg tgaggcctgg cagcctggat ctgcccagcc ctgtgtccct
1141 gtcagagttt gggatgatgt tcccagtgtt gggccctcga agtgaatgca gcggggcctc
1201 ctcccctgaa tgtgaagtag aacgaggaga cagggcagaa ggggcagaga ataaaacaag
1261 tgacaaagcc aacaacaacc ggggcctcag cagtagcagt ggcagtggtg gcagcagtaa
1321 gagccaaagc agcacctccc ctgagggcca ggccttggag aaccggatga accagctctc
1381 cctacagtgc tcaaagggaa gagatggaat tattgctgac ataaaaatgg tgcagattgg
1441 ctgattcatc ctgggccctg gccgatgtgc atatcaacat ttatacatgg aactggagaa
1501 cattgtgcca ataatcattt aatatatgcc aaatcttaca cgtctactct aaactgctct
1561 aatgaagttt cagtgacctt gagggctaaa gattgttctt ctgggtaaga gctcttgggc
1621 tggtttttca gagcagagtt cttgttgtgg gtagactgtg actaggttca cagcctttgt
1681 ggaacattcc gtataacggc attgtggaag caataactag ttcctatgaa agaaccagag
1741 ctgggaagat ggctgggaag ccaggccaaa gtgggggcaa cagcttgctt ctctttctct
1801 tctcaccctc agtttgtatg ggaaaatgga gatgtcctct ccactttatc ccacgatatc
1861 taaaaaaaaa aaaaaaaaaa
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