LOCUS BC006167 1149 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens SEC13 homolog (S. cerevisiae), mRNA (cDNA clone
IMAGE:3959959), partial cds.
ACCESSION BC006167
VERSION BC006167.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1149)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1149)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: n Column: 16.
FEATURES Location/Qualifiers
source 1..1149
/db_xref="H-InvDB:HIT000086609"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3959959"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1149
/gene="SEC13"
/gene_synonym="SEC13R"
/db_xref="GeneID:6396"
/db_xref="HGNC:HGNC:10697"
/db_xref="MIM:600152"
CDS <1..797
/gene="SEC13"
/gene_synonym="SEC13R"
/codon_start=3
/product="SEC13 protein"
/protein_id="AAH06167.1"
/db_xref="GeneID:6396"
/db_xref="HGNC:HGNC:10697"
/db_xref="MIM:600152"
/translation="PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGH
DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP
AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDV
AWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANI
LAVSGGDNKVTLWKESVDGQWVCISDVNKGQGSVSASVTEGQQNEQ"
BASE COUNT 298 a 288 c 321 g 242 t
ORIGIN
1 gtcctgtgtg gcaagtggcc tgggctcacc ccatgtacgg caacatcctg gcatcgtgct
61 cctatgaccg gaaagtcatt atctggagag aggaaaacgg cacctgggag aagagccacg
121 agcatgcggg acacgactcc tcagtgaact cggtgtgctg ggccccccat gactacggcc
181 tgatcctggc ctgtgggagc tcggatgggg ccatctccct gctgacttac accggggaag
241 gccaatggga agtaaagaag atcaacaacg ctcacaccat tggctgcaat gccgtcagct
301 gggcccctgc tgttgtacct ggaagcctca tagaccaccc atcggggcag aaacccaatt
361 acatcaagag gtttgcatca ggtggctgtg acaacctcat caagctgtgg aaggaggagg
421 aggacggcca gtggaaggag gagcagaagc tagaagcgca cagtgactgg gttcgagatg
481 tggcctgggc cccctccatc ggcctgccca ccagcaccat cgccagctgc tcccaggatg
541 gtcgtgtgtt catttggacc tgtgatgatg cctcaagcaa tacgtggtcc cctaaattgt
601 tgcacaagtt caacgatgtg gtgtggcatg tgagctggtc catcacagcc aacatcctgg
661 ctgtctctgg tggagacaat aaggtgaccc tgtggaagga gtcagttgat gggcagtggg
721 tgtgcatcag tgatgtcaac aagggccagg gctccgtatc agcatcagtg acagagggcc
781 agcagaacga gcagtgacaa gacaggtggg gcctggctcc ccacccgcca gctccaggac
841 tgccccttcc tgggccaact aaccagacaa ctgggaagag cccccaactc caacaggatt
901 attttcccag gaggagttac agatgcagcc acagattgat catctgcctt aacgtgatcg
961 gagatgcttt gtaatctact gtccagctga aagcactcat gttacgagga agaaactaca
1021 agtgatgttc aaatctattt tgggtcattt ttatgtacct ttgggttcag gcattatttg
1081 gggggttttg tttccaaagg aactaaataa agtcatattg cttataaaaa aaaaaaaaaa
1141 aaaaaaaaa
//