LOCUS BC006159 2005 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens sulfatase modifying factor 2, mRNA (cDNA clone
IMAGE:3635549), partial cds.
ACCESSION BC006159
VERSION BC006159.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2005)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2005)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: i Column: 18.
FEATURES Location/Qualifiers
source 1..2005
/db_xref="H-InvDB:HIT000086605"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3635549"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2005
/gene="SUMF2"
/gene_synonym="DKFZp66I1024"
/db_xref="GeneID:25870"
/db_xref="MIM:607940"
CDS <1..892
/gene="SUMF2"
/gene_synonym="DKFZp66I1024"
/codon_start=2
/product="SUMF2 protein"
/protein_id="AAH06159.1"
/db_xref="GeneID:25870"
/db_xref="MIM:607940"
/translation="LPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMGTNSPDSRD
GEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVSDELRNK
ATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGKRLPT
EEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPAQN
NYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDS
ASDNLGFRCAADAGRPPGEL"
misc_feature 62..862
/gene="SUMF2"
/gene_synonym="DKFZp66I1024"
/note="DUF323; Region: Domain of unknown function
(DUF323). This presumed domain is found in bacterial
proteins. In some cases these proteins also contain a
protein kinase domain. The function of this domain is
unknown"
/db_xref="CDD:pfam03781"
BASE COUNT 508 a 503 c 525 g 469 t
ORIGIN
1 gttaccgctg ctgcccctgc tgtcgctcct ggtcggcgcg tggctcaagc taggaaatgg
61 acaggctact agcatggtcc aactgcaggg tgggagattc ctgatgggaa caaattctcc
121 agacagcaga gatggtgaag ggcctgtgcg ggaggcgaca gtgaaaccct ttgccatcga
181 catatttcct gtcaccaaca aagatttcag ggattttgtc agggagaaaa agtatcggac
241 agaagctgag atgtttggat ggagctttgt ctttgaggac tttgtctctg atgagctgag
301 aaacaaagcc acccagccaa tgaagtctgt actctggtgg cttccagtgg aaaaggcatt
361 ttggaggcag cctgcaggtc ctggctctgg catccgagag agactggagc acccagtgtt
421 acacgtgagc tggaatgacg cccgtgccta ctgtgcttgg cggggaaaac gactgcccac
481 ggaggaagag tgggagtttg ccgcccgagg gggcttgaag ggtcaagttt acccatgggg
541 gaactggttc cagccaaacc gcaccaacct gtggcaggga aagttcccca agggagacaa
601 agctgaggat ggcttccatg gagtctcccc agtgaatgct ttccccgccc agaacaacta
661 cgggctctat gacctcctgg ggaacgtgtg ggagtggaca gcatcaccgt accaggctgc
721 tgagcaggac atgcgcgtcc tccggggggc atcctggatc gacacagctg atggctctgc
781 caatcaccgg gcccgggtca ccaccaggat gggcaacact ccagattcag cctcagacaa
841 cctcggtttc cgctgtgctg cagacgcagg ccggccgcca ggggagctgt aagcagccgg
901 gtggtgacaa ggagaaaagc cttctagggt cactgtcatt ccctggccat gttgcaaaca
961 gcgcaattcc aagctcgaga gcttcagcct caggaaagaa cttccccttc cctgtctccc
1021 atccctctgt ggcaggcgcc tctcaccagg gcaggagagg actcagcctc ctgtgttttg
1081 gagaaggggc ccaatgtgtg ttgacgatgg ctgggggcca ggtgtttctg ttagaggcca
1141 agtattattg acacaggatt gcaaacacac aaacaattgg aacagagcac tctgaaaggc
1201 cattttttaa gcattttaaa atctattctc tccccctttc tccctggatg attcaggaag
1261 ctgacattgt ttcctcaagg cagaattttc ctggttctgt tttctcagcc agttgctgtg
1321 gaaggagaat gctttctttg tggcctcatc tgtggtttcg tgtccctctg aaggaaacta
1381 gtttccactg tgtaacaggc agacatgtaa ctatttaaag cacagttcag tcctaaaagg
1441 gtctgggaga accagatgat gtactaggtg aagcattgca ttgtgggaat cacaaagcaa
1501 atagtactcc agaaagacaa atatcagaag cttcctattc tttttttttt tttttttttt
1561 ttgagacagg gtctttctct gttgcccagg ctagagtgca ctggtgatca cggctcactc
1621 tagccttgaa ttcctgggcc caagcaattc tcccacctca gcctcctgag tagctgggac
1681 tacaagtgtg caccaccatg cctggctaat tttttgaatt tttgtagtga tgggatctcg
1741 ctctgttgcc cagggtggtc tcgaactcct ggcctcaagc gatcctccca cctcgacctc
1801 ccaaagtgct gggattacag gtgtgagcca cctcgcctgg gcccccttct ccatatgcct
1861 ccaaaaacat gtccctggag agtagcctgc tcccacactg tcactggatg tcatggggcc
1921 aataaaatct cctgcaattg tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaa
//